Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0984 |
Symbol | |
ID | 5321829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1066568 |
End bp | 1067743 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789926 |
Product | elongation factor Tu |
Protein accession | YP_001326672 |
Protein GI | 150396205 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0503391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGA GCAAATTTGA GCGCAATAAG CCGCACGTCA ACATTGGCAC GATTGGCCAC GTTGACCATG GCAAGACGTC GCTGACGGCA GCGATCACGA AGTATTTCGG CGAGTTCAAG GCGTACGACC AGATCGACGC TGCGCCGGAA GAAAAGGCCC GCGGTATCAC CATTTCGACG GCGCACGTCG AATACGAGAC GCCGAACCGT CACTATGCGC ATGTCGACTG CCCCGGCCAC GCCGACTACG TCAAGAACAT GATCACCGGT GCGGCGCAGA TGGACGGCGC GATCCTGGTT GTTTCGGCTG CCGACGGCCC GATGCCGCAG ACGCGCGAAC ACATCCTGCT GGCCCGCCAG GTCGGCGTTC CGGCGATTGT CGTGTTCCTG AACAAGGTCG ACCAGGTCGA CGATGCGGAG CTGCTGGAGC TCGTTGAGCT GGAAGTGCGC GAACTTCTGT CGTCCTACGA ATTCCCGGGC GACGATATTC CGATCGTCAA GGGTTCGGCT CTGGCCGCAC TTGAAGATTC GGACAAGAAG ATCGGCGAAG ATGCGATCCG CGAGCTGATG GCTGCGGTTG ACGCCTACAT CCCGACGCCT GAGCGTCCGA TCGACCAGCC GTTCCTGATG CCGATCGAAG ACGTGTTCTC GATCTCGGGC CGCGGCACGG TCGTGACCGG CCGCGTCGAG CGCGGCATCG TCAAGGTCGG TGAGGAAATC GAAATCGTCG GCATCCGTCC GACGACGAAG ACGACCTGCA CGGGCGTTGA AATGTTCCGC AAGCTTCTCG ATCAGGGCCA GGCCGGCGAC AACATCGGCG CGCTTCTGCG CGGTGTCGAC CGTAACGGTG TCGAGCGCGG CCAGATTCTG TGCAAGCCGG GTTCGGTGAA GCCGCACCGC AAGTTCAAGG CTGAAGCCTA CATCCTGACG AAGGAAGAGG GTGGCCGTCA TACGCCGTTC TTCACCAACT ACCGTCCGCA GTTCTACTTC CGTACGACGG ACGTGACGGG CATCGTGACG CTGCCGGAAG GCACGGAAAT GGTTATGCCG GGCGACAACG TGACCGTTGA CGTCGAGCTG ATCGTGCCGA TCGCGATGGA AGAAAAGCTG CGCTTCGCTA TCCGCGAAGG CGGCCGTACC GTCGGCGCAG GCATCGTCGC CTCCATCGTC GAGTAA
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Protein sequence | MAKSKFERNK PHVNIGTIGH VDHGKTSLTA AITKYFGEFK AYDQIDAAPE EKARGITIST AHVEYETPNR HYAHVDCPGH ADYVKNMITG AAQMDGAILV VSAADGPMPQ TREHILLARQ VGVPAIVVFL NKVDQVDDAE LLELVELEVR ELLSSYEFPG DDIPIVKGSA LAALEDSDKK IGEDAIRELM AAVDAYIPTP ERPIDQPFLM PIEDVFSISG RGTVVTGRVE RGIVKVGEEI EIVGIRPTTK TTCTGVEMFR KLLDQGQAGD NIGALLRGVD RNGVERGQIL CKPGSVKPHR KFKAEAYILT KEEGGRHTPF FTNYRPQFYF RTTDVTGIVT LPEGTEMVMP GDNVTVDVEL IVPIAMEEKL RFAIREGGRT VGAGIVASIV E
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