| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0975 |
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| Symbol | rplA |
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| ID | 5321820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1051589 |
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| End bp | 1052287 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789917 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001326663 |
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| Protein GI | 150396196 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0199586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGAAGA TTGCAAAGCG TGTACAGAAG TCCCGCGAGG GCGTCGATCC TGCGAAGCTC
TATGGTCTCA CCGAAGCCGT GACGATGATC AAAGAGCGTG CGACGGCCAA GTTCGACGAG
ACGATCGAAG TCGCGATGAA CCTCGGCGTC GACCCGCGTC ATGCCGACCA GATGGTCCGC
GGCGTGGTCA ACCTTCCGAA CGGCACCGGC CGCTCGGTCC GTGTCGCCGT TTTTGCCCGT
GGCGCGAAGG CTGACGAAGC CAAGGCTGCC GGCGCTGACG TCGTGGGTGC GGAAGAGCTC
GTCGAAATCG TCCAGGGCGG CAAGATCGAT TTCGATCGCT GCATCGCTAC CCCGGACATG
ATGCCGCTTG TCGGTCGTCT CGGTAAGGTT CTCGGTCCCC GTGGCATGAT GCCGAACCCG
AAGGTCGGTA CGGTTACCAT GGACGTCGCG GGAGCCGTCA AGGCTTCGAA GGGCGGTGCG
GTAGAGTTCC GCGTCGAGAA GGCCGGTATC GTTCACGCCG GCATCGGCAA GGCATCCTTC
GACGCCAAGG CGCTCGAAGA GAATATCCGT GCCTTTGCAG ATGCGGTGAT CAAGGCGAAG
CCGACCGGCG CCAAGGGCAA TTACGTCAAG CGCGTGGCTG TGTCTTCGAC GATGGGTCCC
GGTCTCAAGA TCGATCCGGC GACGATCAGC GCTGCCTGA
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| Protein sequence | MAKIAKRVQK SREGVDPAKL YGLTEAVTMI KERATAKFDE TIEVAMNLGV DPRHADQMVR
GVVNLPNGTG RSVRVAVFAR GAKADEAKAA GADVVGAEEL VEIVQGGKID FDRCIATPDM
MPLVGRLGKV LGPRGMMPNP KVGTVTMDVA GAVKASKGGA VEFRVEKAGI VHAGIGKASF
DAKALEENIR AFADAVIKAK PTGAKGNYVK RVAVSSTMGP GLKIDPATIS AA
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