Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0961 |
Symbol | |
ID | 5321802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1039191 |
End bp | 1040219 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789899 |
Product | peptide chain release factor 2 |
Protein accession | YP_001326649 |
Protein GI | 150396182 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1186] Protein chain release factor B |
TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.379105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00626958 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAACAACA AGGCCGAAGA CCCGTCGCTC TGGAACGACG CGGCAGAGGC ACAGAAACTG ATGCGGGAGC GCCAGCAGCT CGACGATGGC ATCAGTGGCC TGCGTCGGTT CGAGCAGCAG CTCAACGACA ACATCGAGCT CATCGAACTC GGCGAAGAGG AAGGCGATTC GGCAATCGTC TCGGAGGCCG AGGAAGCGCT CCGCCAACTG CGCAACGACG CAGCTAAAAA GCAGGTGGAG GCCATGCTCT CCGGGGAGGC CGACCAGAAC GATACCTATG TCGAAGTCCA TTCGGGCGCC GGTGGCACGG AAAGCCAGGA CTGGGCCAAC ATGCTGCTTC GCATGTATAC GCGATGGGCC GAGCGCCAGG GCTACAAGGT CGAGCTCATG GAAATCCAGG ATGGGGAAGA GGCCGGCATC AAGTCCGCAA CGCTCCTGGT CAAGGGCCAC AATGCCTATG GCTGGCTGAA GACGGAATCG GGCGTGCACC GGCTGGTCCG CATTTCCCCC TATGACAGCA ATGCGCGCCG TCATACGTCC TTCTCGTCCA TCTGGGTCTA TCCCGTGGTG GACGAATCGA TCCAGGTCGA CATCAATGAA AGCGATTGCA GGATCGATAC CTACCGCTCC TCCGGCGCCG GCGGTCAGCA CGTCAACACG ACCGATTCGG CCGTGCGCAT CACGCATATG CCGAGCGGCA TCGTGGTGCA GTGCCAGCAG GAACGCTCAC AGCATAAGAA CCGCGCCAAG GCATGGGACA TGCTCCGTGC GCGGCTTTAC GAGGCCGAAC TGAAGAAGCG CGAGGAGGCG GCCAACGCCG AGGCGGCATC GAAGACCGAG ATCGGCTGGG GTCACCAGAT CCGCTCCTAC GTCCTGCAGC CCTACCAGCT CGTGAAGGAC TTGAGGACAG GCGTCGAAAG CACAAGCCCG GGCGACGTGC TGGACGGTGA ACTGAGCGAG TTCATGGAGG CAGCCCTTGC GCATCGCGTA AGCGGTGGGG CGGATGCGGC GGTCGACGAT TTGAGTTGA
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Protein sequence | MNNKAEDPSL WNDAAEAQKL MRERQQLDDG ISGLRRFEQQ LNDNIELIEL GEEEGDSAIV SEAEEALRQL RNDAAKKQVE AMLSGEADQN DTYVEVHSGA GGTESQDWAN MLLRMYTRWA ERQGYKVELM EIQDGEEAGI KSATLLVKGH NAYGWLKTES GVHRLVRISP YDSNARRHTS FSSIWVYPVV DESIQVDINE SDCRIDTYRS SGAGGQHVNT TDSAVRITHM PSGIVVQCQQ ERSQHKNRAK AWDMLRARLY EAELKKREEA ANAEAASKTE IGWGHQIRSY VLQPYQLVKD LRTGVESTSP GDVLDGELSE FMEAALAHRV SGGADAAVDD LS
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