Gene Smed_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0955 
Symbol 
ID5321796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1028829 
End bp1029596 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content61% 
IMG OID640789894 
ProductDSBA oxidoreductase 
Protein accessionYP_001326644 
Protein GI150396177 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.616231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0061431 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCTCA AGATGAAGAT GATTGCCACA GCATCCGTGA TAGCGCTTGC TGCCGGCGTG 
GTCCTGCCCG CTCCCGCGGC GGCACTCGAT GCCAAGCAGA AGGAAGAATT CGGCGCCTTC
ATCAAGGAGT ATCTGCTCGC CAATCCGGAG ATTATGCTGG AAGTGCAGGA GGCGCTGTCC
GCCAAGCAGC GGGCAAAGCA GCAGGAATCC GCCCAGGCGG CAATCGCCGG CAACAGCGAG
GCGATCTTCA ACTCCACCCA CGACATAGCT CTCGGCAATC CGAACGGCGA CGTGACGATC
GTCGAGTTCT TCGATTACAA TTGCGGCTAT TGCAAGCGCG CTCTGTCCGA CATGGACGCC
ATCCTCGCTG AGGACAAGAA TGTCCGCTTC GTTCTCAAGG AGCTTCCCAT TCTCGGACCC
GAGTCGCTGG CGGCCCACAA GGTCAGCGCC GCCTTCCGCA CGGTAGCACC GGAGAAATAC
GGCGATTTCC ACCGAGCGCT GCTCGGGTCG GAGGAGCGGG CGACTGAGGA AACCGCGATC
GCCGTTGCCG CCAAGCTTGG CGTAACGGAG GAGCAATTGC GCGAGAAAAT GGAAGACGGG
TCGTATGACG CTTCCATGCG GGAGGCCTAT TCGCTTGCCA GCGACCTCGG CATTACGGGC
ACGCCTTCCT ATGTCATCGG CAATGAGGCG GTGTTCGGCG CCGTCGGCGC GCCGGAGATC
GAAGAGAAGG TCGCCAACAT GCGGGCCTGC GGCAAGACCG TCTGCTGA
 
Protein sequence
MTLKMKMIAT ASVIALAAGV VLPAPAAALD AKQKEEFGAF IKEYLLANPE IMLEVQEALS 
AKQRAKQQES AQAAIAGNSE AIFNSTHDIA LGNPNGDVTI VEFFDYNCGY CKRALSDMDA
ILAEDKNVRF VLKELPILGP ESLAAHKVSA AFRTVAPEKY GDFHRALLGS EERATEETAI
AVAAKLGVTE EQLREKMEDG SYDASMREAY SLASDLGITG TPSYVIGNEA VFGAVGAPEI
EEKVANMRAC GKTVC