Gene Smed_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0953 
Symbol 
ID5321794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1027726 
End bp1028202 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content63% 
IMG OID640789892 
Productacetyl-CoA carboxylase biotin carboxyl carrier protein subunit 
Protein accessionYP_001326642 
Protein GI150396175 
COG category[I] Lipid transport and metabolism 
COG ID[COG0511] Biotin carboxyl carrier protein 
TIGRFAM ID[TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.057209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA AGAAACCGGG TATCGATCAG GCGCTGATTC GTGATCTCGC CAATATCCTC 
AACGACACCG ACCTGACTGA GATCGAAGTG GAGCAGGACG ATCTGCGCAT CCGCGTTTCG
CGGAACGGCA CGCCTGTCGC GATGTCGATG CCGGCGATGC CTGCCTACCA GGTGCCGCCC
GCCGCCACCG GCGGCCAGTC CGCCCCTGCA GCCCAGTCTG CCTCCGAAGG CGGCCACAAC
GCCAAGAACG CGGTGACGGC GCCCATGGTC GGCACCGCCT ATCTCGCCCC GGCTCCAGGC
TCCCGCCCCT TCATTGAAGT CGGCGCAACG GTCAAGGAAG GCCAGACGAT CCTGATCATC
GAAGCCATGA AGACGATGAA CCAGATTCCG GCTCCCCGCT CCGGCAAGAT AACGGAAATT
CTCGTGCAGG ACGCGGCCCC GGTCGAATAT GGCGAACCCC TGATCGTGAT CGAGTAA
 
Protein sequence
MAEKKPGIDQ ALIRDLANIL NDTDLTEIEV EQDDLRIRVS RNGTPVAMSM PAMPAYQVPP 
AATGGQSAPA AQSASEGGHN AKNAVTAPMV GTAYLAPAPG SRPFIEVGAT VKEGQTILII
EAMKTMNQIP APRSGKITEI LVQDAAPVEY GEPLIVIE