Gene Smed_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0949 
Symbol 
ID5321790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1024832 
End bp1025284 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content62% 
IMG OID640789889 
Producthypothetical protein 
Protein accessionYP_001326639 
Protein GI150396172 
COG category[S] Function unknown 
COG ID[COG4765] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.385116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.100388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGGT TCAGTCTGCG GGATTTGTTT GGCCGGGGGG CCCGGCTTGC GGCCATTGCC 
CTTCTCCTCG CCGCTCCGGT GGTTTCAACC ACAGAGCCCG CGCAGGCGGC CCGCCTTCCC
AATGCCGTCG CGGTGTTCTC GGGCATCGAC AAGATCACCG GCCGTATTAC CAGCTTTGAC
GTCTATATCG GTGAAACGGT GCAGTTCGGC GCTCTGCAGG TAACTCCGCG CGTCTGCTAC
AGCCGGGACG AAACAGAAGC GCCGAAGACG ACCACCTTCG TGGAAGTCGA CGAGATCACC
CTCGACCGAA AGATCCGCCG TATTTTTACC GGTTGGATGT TTGCGGACAG CCCCGGCCTG
AATGCCGTCG AGCACCCCGT CTATGACGTC TGGCTGCAGT CCTGCAAGAC GACGTCCGAA
GTTCCGCCGC CGGACACGGC AGAGAAACAA TAG
 
Protein sequence
MAGFSLRDLF GRGARLAAIA LLLAAPVVST TEPAQAARLP NAVAVFSGID KITGRITSFD 
VYIGETVQFG ALQVTPRVCY SRDETEAPKT TTFVEVDEIT LDRKIRRIFT GWMFADSPGL
NAVEHPVYDV WLQSCKTTSE VPPPDTAEKQ