Gene Smed_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0948 
Symbol 
ID5321789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1024254 
End bp1024649 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content63% 
IMG OID640789888 
ProductNADH dehydrogenase 
Protein accessionYP_001326638 
Protein GI150396171 
COG category[C] Energy production and conversion 
COG ID[COG3761] NADH:ubiquinone oxidoreductase 17.2 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.15048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCC TGCTGCAGAT TTTCACCTGG TGGAACGGAC AGACGATCGG TACCCGCTTT 
CATACCTGGC GCCACGGTCA GCGCGTCGGC GAAGACGAGT TCGGTAATGT CTATTATCAG
GGCGGCAAGG ATTCCGAAGG CCGGACGCGG CGTTGGGTGA TCTATAATGG TCCTGCCGAG
GCCTCCGCCA TTCCTCCGGG TTGGCACGGC TGGATGCACC ATCGCACCGA TGTCGCGCCC
GCCGATGAGA ATTATGTCGC CCGTGAGTGG CAGAAGCCGC ACCGGGCCAA TCCGACCGGT
ACGCCCTATG CTTATCGTCC GAAGGGTTCG ATCGCCGGCA CCGGCAAGCG CCCGCGTGTG
ACTGGCGATT ACGACGCCTG GACGCCGCGC TCCTGA
 
Protein sequence
MKLLLQIFTW WNGQTIGTRF HTWRHGQRVG EDEFGNVYYQ GGKDSEGRTR RWVIYNGPAE 
ASAIPPGWHG WMHHRTDVAP ADENYVAREW QKPHRANPTG TPYAYRPKGS IAGTGKRPRV
TGDYDAWTPR S