Gene Smed_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0947 
Symbol 
ID5321788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1023598 
End bp1024101 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content59% 
IMG OID640789887 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001326637 
Protein GI150396170 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.15048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGT TCTTCGTCCG TACCGCAGGC GAGCGCGACC TCGATAAGGT TCGCGCTCTG 
CTCGCCGAGA CGTGGCATGC AACCTACGAC ACGTTCTACG GTGTCGAAAA GGTTAAGGAG
CTGACGGCGA AGTGGCATTC CATAGATGCT CTTCGAGCCC GGCTGCAGCG CAAACATTCC
GAATTCGTCG TCGCCGACAC CGGCAGCGAG CTTGCCGGCA TGGGCTATGC CGCCATGTCG
GAGTCGCTGC AAAAGACGGT CGTTCTGCAC CAGCTCTATG TCCTGCCCAG ATTCCAACGT
CGTGGTGTCG GACGCGATAT GTTTGCGGAG CTTGAGACCT GCTTCCCCGA TGCGGAATGC
ATGCTGGTGG AGGTAGAGCC GCAAAACCTT CACGCGCTCG CCTTTTATCA GGCGCATGGA
TTTGCGGAAG TCGCGAAAAC GTCCAGTTGC GGCGACGAAC AGTCCGGCAT ACCGGCGATC
ATCCTCGAAA AGCGTCTCTC CTGA
 
Protein sequence
MTVFFVRTAG ERDLDKVRAL LAETWHATYD TFYGVEKVKE LTAKWHSIDA LRARLQRKHS 
EFVVADTGSE LAGMGYAAMS ESLQKTVVLH QLYVLPRFQR RGVGRDMFAE LETCFPDAEC
MLVEVEPQNL HALAFYQAHG FAEVAKTSSC GDEQSGIPAI ILEKRLS