| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0936 |
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| Symbol | pyrB |
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| ID | 5321777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1013868 |
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| End bp | 1014809 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789876 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_001326626 |
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| Protein GI | 150396159 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0143291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.350081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCT TCCCGCATCG CCACCTGCTC GGCATCAAGG GGCTAACGGA ACAGGATATC
ACGCTCCTGC TCGATCGCGC CGATGAAGCC GTCAAGATCT CTCGTCAGAG AGAGAAGAAG
ACCTCCTCGC TGCGCGGGCT GACGCAGATC AATCTTTTCT TCGAGGCCTC GACCCGGACG
CAGTCGTCTT TCGAACTCGC CGGAAAGCGG CTCGGGGCCG ATGTCATGAA CATGTCCGTG
GGCAACTCGT CGGTCAAGAA AGGCGAGACG CTCATCGATA CGGCGATGAC GCTGAACGCC
ATGCATCCCG ATGTGCTGGT CGTCAGGCAC TCATCGGCGG GGGCTGCCTC GCTTCTCGCC
CAGAAGGTCT CCTGCTCCGT CGTCAATGCC GGCGACGGCC AGCACGAGCA TCCGACGCAG
GCGCTGCTCG ACGCGCTGAC GATACGGCGT GCCAAAGGCA AGCTCTCGCG GATCATCGTG
GCGATCTGCG GCGACGTGCT GCACTCGCGC GTCGCCCGTT CCAATATCCT GCTGTTGAAC
CAGATGGGCG CGCGCGTGCG CGTCGTTGCG CCGGCAACTC TGCTTCCCGC CGGCATCGCC
GAGATGGGCG CGGAGGTCTA CCACTCCATG GCTGAAGGCC TGAAGGATGC CGACGTGGTC
ATGATGCTGA GGCTTCAGCG CGAGCGCATG GCCGGCTCCT TCGTGCCTTC GGTGCGCGAA
TACTTCCATT ACTACGGGCT CGACGCCGAA AAGCTGAAGG CTGCCAAGGA CGATGCGCTG
GTGATGCACC CAGGACCGAT GAACCGAGGG GTCGAGATCG CCTCGGAGAT TGCCGACGGT
CCGCAGAGCG TCATCGAACA GCAAGTCGAG ATGGGCGTCG CCGTACGGAT GGCGGTGATG
GAAACATTGC TACTTTCCCA GAACCAGGGG CCGCGCGTAT GA
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| Protein sequence | MITFPHRHLL GIKGLTEQDI TLLLDRADEA VKISRQREKK TSSLRGLTQI NLFFEASTRT
QSSFELAGKR LGADVMNMSV GNSSVKKGET LIDTAMTLNA MHPDVLVVRH SSAGAASLLA
QKVSCSVVNA GDGQHEHPTQ ALLDALTIRR AKGKLSRIIV AICGDVLHSR VARSNILLLN
QMGARVRVVA PATLLPAGIA EMGAEVYHSM AEGLKDADVV MMLRLQRERM AGSFVPSVRE
YFHYYGLDAE KLKAAKDDAL VMHPGPMNRG VEIASEIADG PQSVIEQQVE MGVAVRMAVM
ETLLLSQNQG PRV
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