Gene Smed_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0930 
Symbol 
ID5321771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1005030 
End bp1005485 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content63% 
IMG OID640789870 
Producthypothetical protein 
Protein accessionYP_001326620 
Protein GI150396153 
COG category[S] Function unknown 
COG ID[COG5349] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.849799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAA CCGCGACAGA CATGCTTCAG CTTGGCGGAG CGCAGGGCGA CGAACGGCCG 
GTCGGCCGGT CGATCAAGCG TGGCCTTTTC GGGACTTGCC CGGCCTGCGG CCGTGGCCGG
CTGTTTCGCA GCTTTCTCAA ATCGGTGGAG GCTTGCGACG CCTGCGGCGA GCGCATGGAT
CATCACCGGG CCGATGACTT CCCACCCTAT ATCGTCGTCA CGATCGTCGG CCATGTCGTA
CTTGGCGGCT ACATGATGAC CGATCTCGTG CTGCCGCTTT CGACGTGGCA GCATCTCGCA
ATCTGGGCGC CGGTGACGCT TGCCAGTTCG CTTGCCCTCA TGCAGCCGGT CAAGGGCGCA
GTCATCGGAC TGCAATGGGC CTTGAGAATG CACGGCTTCG GCGGTCATGA CGACGGGCCC
GAAGACATTC TGCCTCCGCG AGAAACTTCG GCATGA
 
Protein sequence
MKATATDMLQ LGGAQGDERP VGRSIKRGLF GTCPACGRGR LFRSFLKSVE ACDACGERMD 
HHRADDFPPY IVVTIVGHVV LGGYMMTDLV LPLSTWQHLA IWAPVTLASS LALMQPVKGA
VIGLQWALRM HGFGGHDDGP EDILPPRETS A