Gene Smed_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0925 
Symbol 
ID5321766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1000576 
End bp1000947 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content54% 
IMG OID640789865 
Productresponse regulator receiver protein 
Protein accessionYP_001326615 
Protein GI150396148 
COG category[T] Signal transduction mechanisms 
COG ID[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAC AGGTTATGAT TGTTGAGGAT AACGAGCTGA ATATGAAGCT CTTCCGCGAC 
CTGATTGAGG CTTCGGGATA CGCGACGATT CAGACTCGCA ACGGTATGGA AGCGCTTGAA
CTTGCGCGCA AGCACCGGCC GGACCTGATT CTGATGGACA TCCAGTTGCC GGAGGTCTCC
GGTCTCGAGG TCACGAAATG GCTCAAGGAA GACGATGAGC TCCACGTGAT CCCAGTCATT
GCCGTAACCG CCTTCGCCAT GAAGGGCGAC GAGGAGCGCA TCCGCCAGGG AGGATGCGAG
GCCTATGTTT CCAAGCCGAT TTCCGTTCCC AAATTTATTG AAACGATCAA AACATATCTG
GGCGATGCCT GA
 
Protein sequence
MPKQVMIVED NELNMKLFRD LIEASGYATI QTRNGMEALE LARKHRPDLI LMDIQLPEVS 
GLEVTKWLKE DDELHVIPVI AVTAFAMKGD EERIRQGGCE AYVSKPISVP KFIETIKTYL
GDA