| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0918 |
|---|
| Symbol | |
|---|
| ID | 5321759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 990004 |
|---|
| End bp | 991332 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640789858 |
|---|
| Product | prolyl-tRNA synthetase |
|---|
| Protein accession | YP_001326608 |
|---|
| Protein GI | 150396141 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0442] Prolyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGT CCCGCTTTTT CATGCCCATC CTGAAGGAAA ATCCGAAGGA AGCGGAGATC
GTTTCCCATC GATTGATGTT GAGGACAGGC ATGATCCGCC AGCAGTCCGC CGGCATCTAC
ACGTGGCTGC CGCTCGGCAA GCGCGTGCTG GACAAGGTCA ATGCGGTCAT TCGCGAGGAG
CAGAACCGGT CGGGCGCCAT CGAGCTGCTG ATGCCGACGC TGCAGTCGGC GGAGCTCTGG
CAGGAGAGCG GGCGATATGA CGCCTATGGC AAGGAGATGC TGCGTATCAA GGACCGGCAG
GACCGGCCCA TGCTCTACGG ACCGACGAAT GAGGAGATGA TCACCGACAT CTTCCGCTCC
TATGTCAAGT CCTACCGGAA CCTGCCGCTG AACCTCTATC ATATCCAGCT GAAGTTCCGC
GACGAGATCC GCCCGCGCTT CGGAACCATG CGCTCGCGCG AGTTTCTGAT GAAAGATGCC
TATTCCTTCG ACCTGGACCG GGCAGGGGCG GAGCACGCAT ACAAGCGGAT GTTCGCCGCC
TATCTGCGCA CTTTCGACCG GCTGGGCCTG CGCGCGATCC CGATGCGCGC GGACACCGGT
CCGATCGGCG GAAATCTGAG CCACGAGTTC ATCATCCTTG CAGACACGGG CGAGTCCGAG
GTGTTCTGCC ACAAGGACTT TCTCGGCTTC GACATTCCGG GCGAGGATAC GAACTTCGAC
GATGTCGCGA GCATGAATGC GATCTTCGAA AAATGGACGT CGCGTTATGC GGCGACATCG
GAAATGCATG AAGAGGCTGC CTTCGACGCC ATTCCGGAAG GTGAGCGCCT TTCCGCTCGC
GGGATCGAGG TGGGGCACAT CTTCTATTTC GGTACCAAAT ATTCGGAGGC GATGGGAGCC
AAGGTGCTTG GACCGGATGG CAAGGAACAC ACGGTGCACA TGGGCTCCTA TGGGATCGGC
CCGACCCGCC TCGTGCCTGC CATCATCGAA GCGTCGCATG ACGATAACGG CATTATCTGG
CCGAAGGGCA TCGCCCCCTT CGACATTGTC GTCATCAACA TGAAAACGGG CGATGATGCT
TGCGATACGG CTTGCGGCAG GCTCTACTCC GATCTGGGCA AGGCTGGATT CGACGTTCTT
CTTGACGACA CCGACGAGCG TGCCGGCGGA AAGTTTGCGA CCGCCGACAT CATCGGTGTG
CCGGTGCAGG TGATCGTCGG GCCTAGGTCG ATCGCAAATG GCGAGGTCGA AGTGAAGGAC
CGCAAGACCG GTGCGCGAGA GACGATGACA GTCGAAGCGG CGATCAACAA ACTGGTCGCG
GCGAGATAA
|
|---|
| Protein sequence | MRLSRFFMPI LKENPKEAEI VSHRLMLRTG MIRQQSAGIY TWLPLGKRVL DKVNAVIREE
QNRSGAIELL MPTLQSAELW QESGRYDAYG KEMLRIKDRQ DRPMLYGPTN EEMITDIFRS
YVKSYRNLPL NLYHIQLKFR DEIRPRFGTM RSREFLMKDA YSFDLDRAGA EHAYKRMFAA
YLRTFDRLGL RAIPMRADTG PIGGNLSHEF IILADTGESE VFCHKDFLGF DIPGEDTNFD
DVASMNAIFE KWTSRYAATS EMHEEAAFDA IPEGERLSAR GIEVGHIFYF GTKYSEAMGA
KVLGPDGKEH TVHMGSYGIG PTRLVPAIIE ASHDDNGIIW PKGIAPFDIV VINMKTGDDA
CDTACGRLYS DLGKAGFDVL LDDTDERAGG KFATADIIGV PVQVIVGPRS IANGEVEVKD
RKTGARETMT VEAAINKLVA AR
|
|---|
| |