| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0916 |
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| Symbol | |
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| ID | 5321757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 987231 |
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| End bp | 988253 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789856 |
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| Product | putative periplasmic binding ABC transporter protein |
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| Protein accession | YP_001326606 |
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| Protein GI | 150396139 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA AACTATCTTC AGGGGCGGGA TCGGCCGGTG TCGGCAGGCG TCTTTTCTTG
AAATCCGCAG CAATCGGCGG CGCTGCCGCA GCCGGCGGAC TTGCAGCTCC GGCGATCGCT
CAGGGCGCTA AACGGAAGGT GATCTTTGTC GCCCATGAGG ACATCCCCTT CTTTTCCCCG
GTTCGTGCCG GGTTCAAGGA ATTCGGCAAG CTGCGAAACT GGGACACGCA GTTTCTCGCC
CGTGGCACAC CGGCCAACGT CGCCGCAACC GTGCGGTTGC AAGTGGATGC GCTGAACTCC
AGGCCGGACG CGGTCGGCTT TACCCGCATC AATGAAACCG CTTTCGATGA GAATATCATG
CGGGCAAAGG ACGCCGGCAT TCCGATCGTG CTCTACAACG TGGCAAGCGA CGGCTACGAA
AAGCTCGAAG TGCCTTTCGT CGGTCAGGAC TTCATTCCCG CCGGCCGCGT GAACGGCCTT
CAGGCGGCCA TGTACGCGCA TCAACTGACC GGCAAGACCG AAGGCACGAT CCTGATCGAC
AATCCTTCTC CCGGCGTCAG CGCGCTGGAA GAACGGGCGA CCGGCACGGA GCAGGGGATC
GACGAATACA ACGGGAAGAA CGGCACCAAC TACAAGTACG AGACATTTAC CACCGCAAAC
TCGCAGACCG AAGCGCTGTC GCGGATCGAT GCCAAGATGC GCGCGACGCC GGACGTGGTC
GGTTTCGCCA GCACTGTTTC CGGAAACTGG TTCGCAGCAA TCTGGGCCGA AGATAACGGA
ATGACCGGCA AGTTCGCCAA TGGGGGCTTC GACCTTATCC CCGGCGTTCT GGAGGCGATC
GCGGCAGAAA CGTCCCACTG GGCGGTCGGA CAGAACCCCT ATGCTCAGGG CTGGGTCACC
TCGTCACTGC TGGATATGCA GCTTGAGGCC GGATACCAGC CATTCGATTA CGATACCGGC
GCGGAAGTCG TCGACAAATC CAACGTCGAG GCCGTGACCA AGCGCGAAGC GCGTTTCGGG
TGA
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| Protein sequence | MNKKLSSGAG SAGVGRRLFL KSAAIGGAAA AGGLAAPAIA QGAKRKVIFV AHEDIPFFSP
VRAGFKEFGK LRNWDTQFLA RGTPANVAAT VRLQVDALNS RPDAVGFTRI NETAFDENIM
RAKDAGIPIV LYNVASDGYE KLEVPFVGQD FIPAGRVNGL QAAMYAHQLT GKTEGTILID
NPSPGVSALE ERATGTEQGI DEYNGKNGTN YKYETFTTAN SQTEALSRID AKMRATPDVV
GFASTVSGNW FAAIWAEDNG MTGKFANGGF DLIPGVLEAI AAETSHWAVG QNPYAQGWVT
SSLLDMQLEA GYQPFDYDTG AEVVDKSNVE AVTKREARFG
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