Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0915 |
Symbol | |
ID | 5321756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 986411 |
End bp | 987166 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640789855 |
Product | ABC transporter related |
Protein accession | YP_001326605 |
Protein GI | 150396138 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTCGAG TAGAAAATCT TACCAAACGC TTTGGTCATG TGACGGCGAT CAGCAATGTT TCCTGTTCGA TACGCAAGGG CCGGGTGACG GCATTGCTCG GCGACAACGG CGCTGGAAAA TCGACGCTGG TCAAGATGAT CTGCGGTACC TACAAGCCGA CACAAGGCAG CATCTGGATA AGCGCGAAAC AGGTCCATAT GGAAAGCGCC CGTGATGCCC TCGCGCTGGG TATCACGGCC GTCTACCAGG ATCTGGCCTT GGTCGATCAG CGCAATGTTG TCCACAACAT CTCGCTTGGG AATATTCCCA CCAAATGGGG TGGATTGATG GTTGACCGCA AGAAGATGCG GCAGACCGCC GAAAGCGCCC TCAACTACAT GAATGCAAAG CTCCCCTCGC TCGACATCCT CGTGTCTTCC ATGTCTGGCG GCCAGCGCCA GGCGGTCGCG ATCGCGCGTG CCTGTGCGCT CGGGGGGCAA TTGGTGGTGA TGGACGAGCC CACGGCCGCG CTTGGCATCC GTGAGCAGCG CATGGTGCTC GATGTGGTTC ATGACCTGAG GTCCAAGGGC ATTTCGGTCC TGATCATCAG CCACAATCTG GATCATGTGT TCGAAGTGGC CGATGACCTG GTGATCCTGC GCGGCGGCCG CGTCGTCGCA GAAGTCGAGC GAAACTCGGT AGCCCATGAC GACGTCGTCA AATTGATTCT GGCCGGACAG CCCAAAGATG CCGAGACCGA AGGGGAAGCA GCATGA
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Protein sequence | MLRVENLTKR FGHVTAISNV SCSIRKGRVT ALLGDNGAGK STLVKMICGT YKPTQGSIWI SAKQVHMESA RDALALGITA VYQDLALVDQ RNVVHNISLG NIPTKWGGLM VDRKKMRQTA ESALNYMNAK LPSLDILVSS MSGGQRQAVA IARACALGGQ LVVMDEPTAA LGIREQRMVL DVVHDLRSKG ISVLIISHNL DHVFEVADDL VILRGGRVVA EVERNSVAHD DVVKLILAGQ PKDAETEGEA A
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