Gene Smed_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0915 
Symbol 
ID5321756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp986411 
End bp987166 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content58% 
IMG OID640789855 
ProductABC transporter related 
Protein accessionYP_001326605 
Protein GI150396138 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTCGAG TAGAAAATCT TACCAAACGC TTTGGTCATG TGACGGCGAT CAGCAATGTT 
TCCTGTTCGA TACGCAAGGG CCGGGTGACG GCATTGCTCG GCGACAACGG CGCTGGAAAA
TCGACGCTGG TCAAGATGAT CTGCGGTACC TACAAGCCGA CACAAGGCAG CATCTGGATA
AGCGCGAAAC AGGTCCATAT GGAAAGCGCC CGTGATGCCC TCGCGCTGGG TATCACGGCC
GTCTACCAGG ATCTGGCCTT GGTCGATCAG CGCAATGTTG TCCACAACAT CTCGCTTGGG
AATATTCCCA CCAAATGGGG TGGATTGATG GTTGACCGCA AGAAGATGCG GCAGACCGCC
GAAAGCGCCC TCAACTACAT GAATGCAAAG CTCCCCTCGC TCGACATCCT CGTGTCTTCC
ATGTCTGGCG GCCAGCGCCA GGCGGTCGCG ATCGCGCGTG CCTGTGCGCT CGGGGGGCAA
TTGGTGGTGA TGGACGAGCC CACGGCCGCG CTTGGCATCC GTGAGCAGCG CATGGTGCTC
GATGTGGTTC ATGACCTGAG GTCCAAGGGC ATTTCGGTCC TGATCATCAG CCACAATCTG
GATCATGTGT TCGAAGTGGC CGATGACCTG GTGATCCTGC GCGGCGGCCG CGTCGTCGCA
GAAGTCGAGC GAAACTCGGT AGCCCATGAC GACGTCGTCA AATTGATTCT GGCCGGACAG
CCCAAAGATG CCGAGACCGA AGGGGAAGCA GCATGA
 
Protein sequence
MLRVENLTKR FGHVTAISNV SCSIRKGRVT ALLGDNGAGK STLVKMICGT YKPTQGSIWI 
SAKQVHMESA RDALALGITA VYQDLALVDQ RNVVHNISLG NIPTKWGGLM VDRKKMRQTA
ESALNYMNAK LPSLDILVSS MSGGQRQAVA IARACALGGQ LVVMDEPTAA LGIREQRMVL
DVVHDLRSKG ISVLIISHNL DHVFEVADDL VILRGGRVVA EVERNSVAHD DVVKLILAGQ
PKDAETEGEA A