Gene Smed_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0909 
Symbol 
ID5321750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp981466 
End bp981795 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content58% 
IMG OID640789849 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001326599 
Protein GI150396132 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID[TIGR02377] Rieske [2Fe-2S] domain protein, MocE subfamily 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.056825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACA ACGGTGATTG GATCGAGACC TGTAAGGCAC AGGATGTCGG ACGCGAGGAT 
GTCAAGCGGT GGGATCATGG CGATCGCAGC TTCGCGATTT TCCGCACGGC CGACGATCGG
TACTACGTCA CGGACGATAT CTGCACCCAT GAATACGCCC ATATTTCCGA TGGGTTTGTC
GAGGGAACGA CCGTCGAGTG CCCGCGCCAT GCCGGATGTT TCGATTTCCG CACCGGCGAG
GCGCTGAACC CGCCGGTTTG CGTCAACCTC AGGACGTTCC CGGCAAAAGT CGAAGATGGC
TTGGTCTATA TCCGGCTTGC GGACGATTAG
 
Protein sequence
MPDNGDWIET CKAQDVGRED VKRWDHGDRS FAIFRTADDR YYVTDDICTH EYAHISDGFV 
EGTTVECPRH AGCFDFRTGE ALNPPVCVNL RTFPAKVEDG LVYIRLADD