Gene Smed_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0907 
Symbol 
ID5321748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp979229 
End bp979498 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content57% 
IMG OID640789847 
Producthypothetical protein 
Protein accessionYP_001326597 
Protein GI150396130 
COG category[S] Function unknown 
COG ID[COG5454] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.219179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCT TTTCGACCTT CGCCATCTAT TTCATCATCT GGTGGATCAC GCTTTTTGTC 
GTGCTGCCGC TGGGTGTGCG TACGCAGGCC GAGGAGAACG AAGTCGTTCC TGGTACCGTG
GAGAGTGCGC CTGCACGTTT CAGGGCTCTG AGGGTCGTGC TGCTCACGAC GGTCATCGCC
GCGGTGGTCC ATTTCGGCTG GTACGTCCTG TCGGTGAAAC TCGGCTACGA CATCGATGCC
ATTCCGCGCT TTGCGCCGAA GTTCTATTGA
 
Protein sequence
MSFFSTFAIY FIIWWITLFV VLPLGVRTQA EENEVVPGTV ESAPARFRAL RVVLLTTVIA 
AVVHFGWYVL SVKLGYDIDA IPRFAPKFY