Gene Smed_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0898 
Symbol 
ID5321739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp969609 
End bp970100 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content61% 
IMG OID640789838 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_001326588 
Protein GI150396121 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0404509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGTC TTTCGAACGC CGTCAGCTCG CTGTTCCTCA AGGAATTCGT CGGCGCATTC 
CTTCTGTCGA TGCGCTATTT CTTCCGGCCG AAGGCGACCT TGAATTACCC TTACGAGAAG
GGCCCGATCA GTCCGCGCTT TCGCGGCGAG CACGCATTGC GCCGTTATCC GAACGGCGAA
GAGCGTTGCA TCGCCTGCAA ACTGTGCGAG GCGATCTGTC CTGCCCAGGC CATTACCATC
GAGGCCGGGC CGCGCCGCAA CGACGGCACG CGCCGCACGG TGCGCTACGA TATCGACATG
GTGAAGTGCA TCTATTGCGG CTTCTGTCAG GAAGCCTGTC CGGTGGATGC GATCGTCGAG
GGGCCGAATT TCGAATTCTC GACCGAGACG CGCGAAGAGC TCTACTACGA CAAGGAGAAG
CTGCTCGCCA ACGGTGACCG GTGGGAGCGT GAAATCGCGC GCAACATTGC GATGGACTCG
CCCTACCGCT GA
 
Protein sequence
MAGLSNAVSS LFLKEFVGAF LLSMRYFFRP KATLNYPYEK GPISPRFRGE HALRRYPNGE 
ERCIACKLCE AICPAQAITI EAGPRRNDGT RRTVRYDIDM VKCIYCGFCQ EACPVDAIVE
GPNFEFSTET REELYYDKEK LLANGDRWER EIARNIAMDS PYR