Gene Smed_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0896 
Symbol 
ID5321737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp966399 
End bp968480 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content64% 
IMG OID640789836 
ProductNADH dehydrogenase subunit G 
Protein accessionYP_001326586 
Protein GI150396119 
COG category[C] Energy production and conversion 
COG ID[COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 
TIGRFAM ID[TIGR01973] NADH-quinone oxidoreductase, chain G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.380192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGC TGAAAGTCGA CGGAAAAGAG ATCGAGGTCC CGGATCATTT CACGCTGCTT 
CAGGCATGCG AGGAGGCCGG CGCCGAGGTT CCGCGCTTCT GTTTCCATGA GCGGCTTTCG
GTTGCCGGCA ACTGCCGCAT GTGTCTGATC GAGGTGAAGG GCGGACCGCC GAAGCCGGCG
GCTTCCTGTG CCATGGGCGT GCGCGACCTT CGTCCCGGTC CGAACGGCGA GACGCCGGAA
GTCTTCACGA CCACACCGAT GGTCAAGAAG GCGCGCGAGG GCGTCATGGA GTTCCTGCTC
ATCAACCACC CGCTGGACTG CCCGATCTGC GACCAGGGCG GCGAGTGCGA CCTTCAGGAC
CAGGCGATGG CGTTCGGCAT CGACAGCTCG CGCTATCAGG AAAACAAGCG CGCGGTCGAG
GACAAATATA TCGGTCCGCT CGTCAAGACC GTGATGAACC GCTGCATCCA CTGCACGCGT
TGCGTGAGGT TCACGACGGA AGTCGCCGGC ATCGCCGAAC TCGGCCTGAT CGGCCGCGGC
GAGGACGCCG AGATCACCAC CTATCTCGAG CAGGCGATGA CCTCGGAACT GCAGGGCAAC
GTCGTTGACC TCTGCCCGGT CGGCGCGCTG ACATCGAAGC CATTCTCCTT TACCGCGCGC
CCGTGGGAGC TCGGCAAGAC CGAGTCGATC GATGTCATGG ATGCCGTCGG CTCGGCGATC
CGCGTCGATA CGCGCGGCCG CGAAGTCATG CGGGTCATGC CGCGGGTCAA CGAGGAGATC
AACGAAGAGT GGATCTCCGA CAAGACCCGC TTCATCTGGG ACGGCCTCAA GACGCAGCGT
CTGGACCGCC CCTATGTCAA GAAGGACGGC CGACTGCAGC AGGCAAGCTG GGCAGAGGCT
TTCCAGGCGA TCAAGGCCGC CATTGCCGCC ACGTCCGGTG ACAGGATCGG CGCGATCGCA
GGCGATCTCG CTTCTGTCGA GGAAATGTAT GCGCTGAAGG AACTCGTCGC CTCGCTCGGC
TCCGAGAATC TCGACTGCCG TCAGGACGGT GCAGCACTCG ACCCGTCGCT CGGCCGCGCC
AGCTACATCT TCAACCCGAC CATCCAGGGT ATCGAAGACG CCGATGCGCT CATCATCATC
GGCTCCAATC CGCGCTTCGA AGCCTCGGTT CTCAATGCTC GCATCCGCAA GCGCCATCGC
ATGGGCAACT TCCCCATAGG CGTGATCGGC GAGCCGGGCG AACTGCGTTA CGATTACGAG
TATCTTGGCG CGGGTGCCGA TACACTCGCC GAGCTCGTTT CCGGCAAGGC CAAGTTCTTC
GCGACGCTTG AAAAGGCTGC GCGTCCGCTG ATCATTGTCG GCCAGGGTGC TCTTGCAGGG
GAGGGCGGCG CGGCCGTACT CGCCAATGCG GCGAAGCTTG CCGTTGCAGT CGGCGCCGTG
AACGCCGAGT GGAACGGATT TGCCGTGCTT CACACCGCGG CCGCCCGCGT CGGCGGTCTC
GATCTCGGCT TCGTGCCGGG CGGGAGCGGC AAGCCGGCCG GCGAAATGGT CGAGGGCACG
GATGTCCTTT TCCTGCTCGG GGCCGACGAG ATCGACCTCT CCGCCAGGAA GGCCGGCTTT
ACCGTTTATA TCGGTTCGCA CGGCGACAAC GGCGCGCACG CCGCGGACGT CATCCTTCCC
GGCGCGACCT ACACGGAAAA GTCCGGCACA TGGGTGAACA CCGAGGGACG CGTACAGATC
GGCAACCGCG CCGCTTTCGC ACCGGGCGAA GCCCGCGAAG ACTGGGCCAT TATTCGTGCG
CTTTCCGACG TGCTCGGCAA GAAGCTGCCC TTCGACTCGC TTGGAGAATT GCGCGCTAAA
CTCTATGCCG CCCATCCGCA TTTCGCCGTG CCAGACGAGA TCGCCGCCGG CAGCAGCGAC
GAAATTGCCG CACTTGCCCA AAAAGCCGGT GCGATGGCGA AATCCGTGTT TGCGTCTCCG
GTCAAAGACT TCTATTTGAC GAACCCGATA GCGCGCGCGT CCGCCGTCAT GGCCGAGTGC
TCGGCCTTGG CGCGCAACAA TTTCAAAGCT GCCGCGGAAT GA
 
Protein sequence
MAKLKVDGKE IEVPDHFTLL QACEEAGAEV PRFCFHERLS VAGNCRMCLI EVKGGPPKPA 
ASCAMGVRDL RPGPNGETPE VFTTTPMVKK AREGVMEFLL INHPLDCPIC DQGGECDLQD
QAMAFGIDSS RYQENKRAVE DKYIGPLVKT VMNRCIHCTR CVRFTTEVAG IAELGLIGRG
EDAEITTYLE QAMTSELQGN VVDLCPVGAL TSKPFSFTAR PWELGKTESI DVMDAVGSAI
RVDTRGREVM RVMPRVNEEI NEEWISDKTR FIWDGLKTQR LDRPYVKKDG RLQQASWAEA
FQAIKAAIAA TSGDRIGAIA GDLASVEEMY ALKELVASLG SENLDCRQDG AALDPSLGRA
SYIFNPTIQG IEDADALIII GSNPRFEASV LNARIRKRHR MGNFPIGVIG EPGELRYDYE
YLGAGADTLA ELVSGKAKFF ATLEKAARPL IIVGQGALAG EGGAAVLANA AKLAVAVGAV
NAEWNGFAVL HTAAARVGGL DLGFVPGGSG KPAGEMVEGT DVLFLLGADE IDLSARKAGF
TVYIGSHGDN GAHAADVILP GATYTEKSGT WVNTEGRVQI GNRAAFAPGE AREDWAIIRA
LSDVLGKKLP FDSLGELRAK LYAAHPHFAV PDEIAAGSSD EIAALAQKAG AMAKSVFASP
VKDFYLTNPI ARASAVMAEC SALARNNFKA AAE