Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0891 |
Symbol | |
ID | 5321732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 962007 |
End bp | 963197 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789831 |
Product | NADH dehydrogenase subunit D |
Protein accession | YP_001326581 |
Protein GI | 150396114 |
COG category | [C] Energy production and conversion |
COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.984899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC ATAACGTCCG CAACTTCAAC ATCAACTTCG GCCCGCAGCA TCCGGCGGCG CACGGCGTTC TGCGTCTGGT GCTGGAGCTT GACGGCGAGA TCGTCGAGCG TGTCGACCCG CATATAGGCC TTTTGCATCG CGGCACGGAG AAGCTGATCG AGGCCAAGAC CTATCTGCAG GCGATTCCTT ATTTCGACCG GCTCGACTAT GTCGCGCCGA TGAACCAGGA GCACGCTTTC GCGCTTGCAG TGGAGAGGTT GACGGGCACG CAGGTGCCGA TCCGCGGTCA GCTGATCCGG GTTCTCTATT CCGAGATCGG TCGTATCCTT TCGCACCTCC TCAATGTGAC CACCCAGGCC ATGGATGTCG GCGCGCTTAC CCCGCCGCTC TGGGGCTTCG AGGAGCGCGA GAAGCTGATG GTCTTTTACG AGCGCGCCTG CGGCGCGCGC ATGCATGCCG CATATTTCCG CCCGGGCGGC GTGCACCAGG ATCTGCCGCA TCAACTGGTC GAGGATATCG GCAAGTGGAT CGACCCGTTC CTGAAGACCG TCGACGATAT CGACGAGCTT CTGACCGGCA ACCGCATCTT CAAGCAGCGC AACGTCGATA TCGGCGTCGT CAGCCTGGAA GACGCCTGGG CCTGGGGTTT CTCGGGCGTC ATGGTGCGCG GCTCGGGCGC GGCCTGGGAC CTGCGCCGTT CGCAGCCCTA TGAATGCTAT TCCGACCTGG AGTTCGACAT TCCGATCGGC AAGAACGGCG ATTGCTTCGA CCGTTATCTC ATCCGGATGA TCGAGATGCG GGAGTCCGCC CGCATCATGC GCCAATGCGT CGATCGCCTG CTGGGCGATG CCAAGGTCGG TCCGGTCTCC TCGCTCGACG GCAAGATCGT GCCGCCGAAG CGGGGCGAGA TGAAGCGGTC GATGGAGGCG CTGATCCATC ACTTCAAGCT CTACACCGAG GGCTATCACG TGCCGGCCGG CGACGTTTAT GCCGCGGTCG AGGCGCCCAA GGGCGAGTTC GGCGTCTATC TCGTATCCGA CGGCACCAAC AAGCCCTACC GCTGCAAGAT ACGTGCACCG GGCTACGCCC ATCTTCAGGC GATGGATTTC CTCTGTCGCG GACACCAGCT TGCCGATGTT TCGGCCGTGC TGGGCTCTCT CGATATCGTT TTCGGCGAGG TGGATCGCTG A
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Protein sequence | MTEHNVRNFN INFGPQHPAA HGVLRLVLEL DGEIVERVDP HIGLLHRGTE KLIEAKTYLQ AIPYFDRLDY VAPMNQEHAF ALAVERLTGT QVPIRGQLIR VLYSEIGRIL SHLLNVTTQA MDVGALTPPL WGFEEREKLM VFYERACGAR MHAAYFRPGG VHQDLPHQLV EDIGKWIDPF LKTVDDIDEL LTGNRIFKQR NVDIGVVSLE DAWAWGFSGV MVRGSGAAWD LRRSQPYECY SDLEFDIPIG KNGDCFDRYL IRMIEMRESA RIMRQCVDRL LGDAKVGPVS SLDGKIVPPK RGEMKRSMEA LIHHFKLYTE GYHVPAGDVY AAVEAPKGEF GVYLVSDGTN KPYRCKIRAP GYAHLQAMDF LCRGHQLADV SAVLGSLDIV FGEVDR
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