| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0886 |
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| Symbol | |
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| ID | 5321724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 951802 |
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| End bp | 958143 |
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| Gene Length | 6342 bp |
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| Protein Length | 2113 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640789823 |
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| Product | hypothetical protein |
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| Protein accession | YP_001326576 |
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| Protein GI | 150396109 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCCC GTGTTTTGCC TGGCCAGATT TCTCATCTCG GTATCCGGGC GGAGATCTAT
GGCGAAGTGC GGGAGTGGAA CTTCGGCTCG TTTCTCGACG GCCAATACGA GCCGGTCGGA
ATTCCGGGCG ATCCTCGCGA TTTCCTCGGC GGGTTCCGAG GACAGATGGG CATGCGGTCC
ACGATAGTTG GCTCGGCCAG CGTGGAGCGT GGGCTTGGGG CGGCGCTTGT CGACCAGATA
GCCGCCTTCG CGAGCGACCT GTACAACCGG CAAATCAACT ACGAGCCGGT GCCGAACCGG
CTGGGAAGGC AGGCGAATTC CAATTCCGCC GCTGCCTACG TGATGCGGAT GCTCGGAATT
GATCCAAATT CTCTATCCTA TCAGGGTAAT CCCGTAGGTC TCAACGTTGA TCTGTCCGAC
CGACGGTTCG GCCTGCCATC GCCGGGCTTC TATTCGGGAC GCGCACACGC TGATTATTTG
GACTGGCAAT ATGGTGACGC GGTGCCGACT CCGGCCCCGA GACCAACCGA CCTTGCGCCT
TCCGTCACCT CACCCGTACC GCAGCCATCT GGCGTGCAGC AGCCCCCAAT TCTATCGCCG
ATAAACTATG TGCCGGGCGC GCCGATTGGA GTAAGCCAGA CTCCTGCAAC ACCCATCACC
GCTCCCAGCG CCGTTTTTCC CAATGCGCCG GTTTCAGCGC CGACTGTCTC GGCTCCCCCG
AATCCAGTCG CCCCCTCGTC TCTCGTCAAC ATCATCGACC AGAACCCGCA AAAACCGTCA
TCGCTCAATC CGAACAAGTC GCAGAAATCG ACCAAAAGCG GCAAACAAGG TGGCGGCACA
AACCGCAATT CGGACCGTGG CGGCAGCCGT AGCGGTGATC ATTACGGCGG CGTCGACCGA
AACGGCGGCT TCGGCGGTTC CAAATCGACC TCCGGTGGCA TCTCTTCGAA GAACTCTGGC
TCCGGCGGAA AGAGCGGCGG GTCGTCTCCC AAGGACAAGG GCTCCAAGTC GACCGGAAAG
AGCGGCGGAG GCTGGGGCAA TGGCAATAGC CCAGGCGATA CCGCCAGGGG CAACGGGTTC
GGCGGCTCCG GCCCGTCGGT CGGCAAAGAC CCCGGCGGAC GTAGTTTTCA GCATGAAGGC
AAGCGCGACA ATAATCAAAA GAGCAAATCC ACAGGCGGCT TCGGCGGATT GAGTGTCCCC
GTCCTCCTCG ACCTCACCGG CAACGGCCTC GCCGTCGATC CCCTCTCCTC CTCGTCCTTC
TTCGTCGATC TCGACGGCAG CGGCTATCTC CACCGCATGG CTTCGGCGGG CGCCGGAACC
GGCATGCTTG TTCTCGACAT CGGCGGCGAC GGCAAGATCA GCGATGCCAG CGAATTCGTC
TTCACCGAAT GGGACAAGTC GGCGACAGGC GATCTCGAGG CTGTCAGGAA CGTCTTCGAC
ACCAACGGCA ATGGCACGCT CGATGCCGGC GATGCGCGCT GGTCCGAGTT CAAGGTGCTG
GTCGACGGCA CCATGGTCAC GCTCGATTCG CTCGGCATCG CCTCGATCGA CCTGACGCCT
AGGGGTAGTG GGCAGAACTT TGCCGACGGC TCGGCTATTC TCGGTACCAC GACCTACACG
CGGACGGACG GTTCGACCGG CACCGTCGGT GACGCCGCCC TTGCCGTCGA TGGCAATGGC
TATCTCATCC GGCGAAGCTC GGAGACGAGT GCCGACGGGT CGACCACGGA AGACGTCTTC
GGCTATTCGC CGGACGGCCG CCTCGCCTTC CGCAACCTGA TCACCAGAAG CGCGGACGGG
CAATCGACGT TCACGCAATT CGACGACGAC GGCAACGGTA CCTTCGATCG TTCGCAGCGG
ATCGAGGTGA CGACGGATGC CGGCGGCAAC AGGCACCGCG TCGTCAGCAA CTTCAATGCC
GACGGCTCGC TCCGCGACCG CACGACGACG ACCACCGGCG CCGGCGGCCG CACCGTCACC
ACCACGATCG ACCAGGACGG CGACGGCACC GCCGACCAGA GCGAGATCTT CACCACCAAT
GCCGACGGCT CGACGACGAC CGTCACCAGG GCGCTCGCGC CCGACGGATC CTTGCTCGGC
GAGGTCAAAG TTGCCGGCAG CGCGGATGGA CTCTCGAAAA CCACTTCCAC CGACGAGAAC
GGCGACGGAG GGTACGACTC CGTCATTTCC GACGTGACGA CGATCAACAG CGAGGGCGAA
CGCGTACGAA CGGTCGATAC GCGCAACGCC GACGGCTCGC TCCGGGATCG TTCCACCACG
ACGACGGCCG CCGATGGCCG CAGCCGCAGC ATCTTTTCGG ACTTCGACGG AGACGGCGTC
ACCGACGAGC GGCAGGAGGT ACGCATCTCG GCCGGCGAAG ACGGCAGCAC GACGACGGAC
ATTGCTGCCT ACAGCAGCGA CGACGCACTG CTCGGCCGCG AGGAAACGAC GGCGAGTGCC
GACGGCAAGA GGACGACCAC CCGCTCCGAC CTTGACGGCG ACGGAACGGT GGACCGCACC
ATGACCATCG CGATGGTTTC CCAAGCGGAC GGGGCCAGTA CGCAGACCGA GACCGCTACC
AGCGCGGACG GTACGTTGCT GTCGCGCACC GTCACGAGCC GAAGCGCCGA CGGCAAGCTG
GTGACGACGG AGGCGGACGC CAACGGCGAC GGGGCGGTCG AACGCCTTAC GAAGATCACG
GTCGGAGGCG ACGGCGCGAC GACCGAGGAG ATTGCGGAAA CGCATCCGAA CGGAACGGCC
GCCGGCCGAA GCGTCAAGCT TACCGCGGCG GACGGCCTTT CGTGGATACG GACGACGGAC
ATCGACGGGA ACGGCGCGAC CGACCGCACC GAGAGCTCGA CCACCACCAT CAATGCCGAT
GGCAGCCGCA CGGAAACCGC GGCGATCAGA AGCGGCAATG GCAGCCTGAT CGGACAGAGC
GTCACGACCA CGTCATCCGA CAGCCTGAGC CAGACGGTCC AACAGGACGT GACCGGCGAC
GGCGCCGCGG ACCTTATTGC AAGCGACCGG ATCGCATTGA ACGCCGACGG GACCCGAACC
GAAACCATCG ACACCAGGAG CGGCAACGGC ACCCTGCTCG GCTCCACCGT GAAGACGGTC
AGCGCCGAGC GCAAGACGAC GACGGTCGCC ATCGATGCGG ACGGCGACGG CACCATCGAC
CTCCAGACGG TTTCCGTGAT GGCGAGCGAC GGAAGCGCTG TCGTGACCGA GCGTGCAACC
GCGTCGAACG GCGCCTTGCT GGCGCAATCG AAGTCTACGG CGAGCCGGGA CGGCTTGAAG
CAGGTTCTGC TTACCGACGC CGATGGCGAC GGCACGTTCG AGCATGAGGC CGCGACCGAA
ACGACCCTCG GTGCGGACGG CAGCCGTACG GTTACCAGCA CGTTGCGCGC GGGCAACGGC
ACCCTGATCG AGCGAACGGT TTCGAAAACC AGCGACGACG GCTTTGCGGC GTCGGTCGAA
ACGGATGCCA ACGGCGACGG TATCGTCGAC CTTCGTGCAA GCGAGACGAA GCGGATCAAC
GCCGATGGCT CGGTTACGGT CACGGTGAAG AACCAGCAAG GCACCAGCAT CGTCGGCAGC
ACGGAAACGG CCACCAGCGG CAACGGCCTC ACGCGGACGA TCCGGACCGA CGCGGACGGC
AATGGTACGG TGGATACGAC CGCCACGAGC ACGCGCGTGC TGCAGGCGAA CGGTTCGATA
ACGGACACGG TCACCGTCAC CAGTGGGTCT GGCGCCACCC TTTCGCGCAC CGTGACGACG
TCGAGCGCCG ACGGCAGAAG CCTGTCGACG GCGGCCGACA TCGACGGCGA CCTGAAGGAC
GACGTGACCA ACGTCACCCT CGTCAATGCC GACGGTTCGG CTACGTCGAC GGCATCGACT
TTCGCGAGCG CGAAGCTTCA GTCCCGGTCG ACAGCGACCA CGAGCGCCAA CGGCCTGGTC
ACGAAATCCG AGACGGATGC GAACGGCGAC GGCGTTGCGG ATCGCGCGGT GGAGACGGCG
ACAGTCCTGA ATGCCAGCGG CGGCAGGACC GTGACCGTTC GCGAATTCGG CGCGCATGGC
GCGGTGAAAT CGAAGACCGT TGTCGAGACC AGCGCCAATG GCCTCTCGGA GACGACACAA
TGGTCGGCCA CCGGGGACAA GGTGACGCGA TCCAGAACAA TGACGGCCAC CGTCAATGCC
GACGGCAGCA CCGGTTCGGC CGAGAGCTAT TTCAAGGCCG GGGGGGCGCT CGAAAGCAAG
ATCGTCTCGG CGACCAGCGC CGACAGGAAG ACGACGACTG TCGCGGGCGA TATGGACGGC
AACGGCGTGA TCGACCGCAA GGCGGTCAGC ACCGTCAATG CCGACGGCAG CACGACGACG
GTCCTGTCCG ACCTCGGCAG CGACGGCGTC AAGGTCGTCG GCAGGAAGAC GGTGACCGCG
AGCGGTAACG GCCTGAAGAC GACATCCGAT TACGACACCG ACGGCAACGG CGCGCTCGAT
ACGCGCTTCA CCTCGTCGAC GGCGTTCAAC GGCAACGGCA GCAGGACGGA AACAGTCACG
CGACAGGATG GCGCTCTGAA GACGCAGGAG AAGGCGGTTA CGGAGATCTC CGCGGACGAA
CTGAGCATCA CGCGGAAATG GGACCTCAAC GGCGACGGCA GCTTCGAGAG GAGCCGCACC
GACGTGACGA AGCGCAATGC CGACGGCTCC GTGACGAGAA AAGTCAGCGA ACTCAGCGGC
ACGACGTCCA CGCGCCAGGC CGAGACCACG ACGAGCGCCA ATGGGCTGTC GGTCACCCAC
CGGTGGGACC TCGACGGCAA CGGCAGCTAC GATCAGTCTT CGACGGACAC GACCGTGCTG
AACGGCAACG GTTCCGTGAC GCGATCAGTG ACGAGCAAAA AGGCCGACGG TTCGCAGATC
GCCAGATCGG TCGAGACGCG AAGTGCCGAC GGCCGTAGCG TCACGGTCAC GGAAGACCGG
ACGGCACTCG GGCTCGCCAG CCGCGCGTTG GTCAGCTCCA AGACGACGCT TGCGGACGGC
TCGGTGGTCG AGACGCTGTC TATTCTCGAC GCAGCGAAGA AGCTTGCGGA GAAGCAGACG
ACGACCGCGA GCGCAGACAG CCGGGAAATC AGCATCGTCC GCGACAGCGA TGGCGACGGC
AAGACGGATC AAACCGAAAC CTATACGCGC TTCGTCGACG GATCGCAGTC GACCGTCATC
ACCGGCTATA GCAAATCCGG CACGAAACTC GATGGCACCA CGATCACGAC CTCGGCCGAC
GGGCGGACGA CGACCACATC TTGGGATCTC GACGGCAACG GTACGACGGA CCGCCTGCGC
AGAACGGTGC TGACGGCCAA TGCCGACGGA AGCGAAAACA CCGTTTCAAC CGACACGACG
GCCGCCGGCG CGATCCGGAG CAAAACGGCC GCGAAGGTGA GCGCCGACGG CCGGAGCGAA
CTCGTCTCGC GCGACCTCAA CGGCGATGGC TTGACCGACA GCACGGAAAC GACCGTCAGG
GACCTCTCCG GCGCGGCCGT CACGACCATC GTCAACAATG CGGAAGCACG CAAAACCTCC
TATCTCATCG ATAGCGATGT CGCCTGGAAG GAGGCGATCG CCGCAAAGAG CGAGATCGCC
GTGACCGCCG ACGGCAACGG CCGGACCATG CGCTCCGACT TCGACGGCAA CGGCACCTAC
GAATATGCCG AAATGGCGGC GACGCAGATC GACGGGTCCG TCTTGAGCAC GATCACTGAG
ACGGACAGCA AGGGCGCGGT CATTGCCAGG GGCACGAGGA TCGAAAGCGC CGACGGCCGG
ACCGTGAAAC TCGAGAAAGA TGCCGATAAT GACGGCGACC GCGACCGGAC ACAGACGGCC
GTAACCCATC TCGACGGCGC GGTCACGCTG ACCACCGTCG AGTGGACCTC GGCCACCAGC
ATCAAGGAAA CGGTGACCGA GAGCTTCAAC GCCACCGGCA AGCTGACCCG CCGCCTGACG
ACGGACGCCG CCGGCAAGCG AACGCAGGAA CTGCTGCTGC TCGCCGACGG AACGATGACC
GACTCCGTCT ATGACGGCGC AAGCGGGAAA ACGCTATCCG TCACCAGGCT CAGCAAGGAC
GGAGTCCCGG TTACCGCTAC GTTCTACGAT CCGCTCGGCG CAGAGAAATG GAGGAGGCGA
CGCAGACCTT CGACGCTGCG GGAGAACTCA TCAAGCAGGT TCAGTCGAAT GACGACGGGT
CCAGGCAGAC CGATACGTTC GATGTCGCCA AAAAGCAGAG CTGGGCGCAG CAGACGGATG
TCAACGACAA AGCGGGCGCC CTCACCCAGC GTTCCTACCT GA
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| Protein sequence | MFSRVLPGQI SHLGIRAEIY GEVREWNFGS FLDGQYEPVG IPGDPRDFLG GFRGQMGMRS
TIVGSASVER GLGAALVDQI AAFASDLYNR QINYEPVPNR LGRQANSNSA AAYVMRMLGI
DPNSLSYQGN PVGLNVDLSD RRFGLPSPGF YSGRAHADYL DWQYGDAVPT PAPRPTDLAP
SVTSPVPQPS GVQQPPILSP INYVPGAPIG VSQTPATPIT APSAVFPNAP VSAPTVSAPP
NPVAPSSLVN IIDQNPQKPS SLNPNKSQKS TKSGKQGGGT NRNSDRGGSR SGDHYGGVDR
NGGFGGSKST SGGISSKNSG SGGKSGGSSP KDKGSKSTGK SGGGWGNGNS PGDTARGNGF
GGSGPSVGKD PGGRSFQHEG KRDNNQKSKS TGGFGGLSVP VLLDLTGNGL AVDPLSSSSF
FVDLDGSGYL HRMASAGAGT GMLVLDIGGD GKISDASEFV FTEWDKSATG DLEAVRNVFD
TNGNGTLDAG DARWSEFKVL VDGTMVTLDS LGIASIDLTP RGSGQNFADG SAILGTTTYT
RTDGSTGTVG DAALAVDGNG YLIRRSSETS ADGSTTEDVF GYSPDGRLAF RNLITRSADG
QSTFTQFDDD GNGTFDRSQR IEVTTDAGGN RHRVVSNFNA DGSLRDRTTT TTGAGGRTVT
TTIDQDGDGT ADQSEIFTTN ADGSTTTVTR ALAPDGSLLG EVKVAGSADG LSKTTSTDEN
GDGGYDSVIS DVTTINSEGE RVRTVDTRNA DGSLRDRSTT TTAADGRSRS IFSDFDGDGV
TDERQEVRIS AGEDGSTTTD IAAYSSDDAL LGREETTASA DGKRTTTRSD LDGDGTVDRT
MTIAMVSQAD GASTQTETAT SADGTLLSRT VTSRSADGKL VTTEADANGD GAVERLTKIT
VGGDGATTEE IAETHPNGTA AGRSVKLTAA DGLSWIRTTD IDGNGATDRT ESSTTTINAD
GSRTETAAIR SGNGSLIGQS VTTTSSDSLS QTVQQDVTGD GAADLIASDR IALNADGTRT
ETIDTRSGNG TLLGSTVKTV SAERKTTTVA IDADGDGTID LQTVSVMASD GSAVVTERAT
ASNGALLAQS KSTASRDGLK QVLLTDADGD GTFEHEAATE TTLGADGSRT VTSTLRAGNG
TLIERTVSKT SDDGFAASVE TDANGDGIVD LRASETKRIN ADGSVTVTVK NQQGTSIVGS
TETATSGNGL TRTIRTDADG NGTVDTTATS TRVLQANGSI TDTVTVTSGS GATLSRTVTT
SSADGRSLST AADIDGDLKD DVTNVTLVNA DGSATSTAST FASAKLQSRS TATTSANGLV
TKSETDANGD GVADRAVETA TVLNASGGRT VTVREFGAHG AVKSKTVVET SANGLSETTQ
WSATGDKVTR SRTMTATVNA DGSTGSAESY FKAGGALESK IVSATSADRK TTTVAGDMDG
NGVIDRKAVS TVNADGSTTT VLSDLGSDGV KVVGRKTVTA SGNGLKTTSD YDTDGNGALD
TRFTSSTAFN GNGSRTETVT RQDGALKTQE KAVTEISADE LSITRKWDLN GDGSFERSRT
DVTKRNADGS VTRKVSELSG TTSTRQAETT TSANGLSVTH RWDLDGNGSY DQSSTDTTVL
NGNGSVTRSV TSKKADGSQI ARSVETRSAD GRSVTVTEDR TALGLASRAL VSSKTTLADG
SVVETLSILD AAKKLAEKQT TTASADSREI SIVRDSDGDG KTDQTETYTR FVDGSQSTVI
TGYSKSGTKL DGTTITTSAD GRTTTTSWDL DGNGTTDRLR RTVLTANADG SENTVSTDTT
AAGAIRSKTA AKVSADGRSE LVSRDLNGDG LTDSTETTVR DLSGAAVTTI VNNAEARKTS
YLIDSDVAWK EAIAAKSEIA VTADGNGRTM RSDFDGNGTY EYAEMAATQI DGSVLSTITE
TDSKGAVIAR GTRIESADGR TVKLEKDADN DGDRDRTQTA VTHLDGAVTL TTVEWTSATS
IKETVTESFN ATGKLTRRLT TDAAGKRTQE LLLLADGTMT DSVYDGASGK TLSVTRLSKD
GVPVTATFYD PLGAEKWRRR RRPSTLRENS SSRFSRMTTG PGRPIRSMSP KSRAGRSRRM
STTKRAPSPS VPT
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