Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0880 |
Symbol | |
ID | 5321718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 944588 |
End bp | 944986 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640789817 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001326570 |
Protein GI | 150396103 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.592364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATCT TCGAGTGCGG ATCGAGACCC TCGACGCGCG GGCCCGCCGA ATACTTCACC GGATCCGTAC GCCTGGACCC TGCCTTCGAG GCGCCGTCAC CCGCACGGCT ACGCGGCGCA ACCGTGACCT TCGAGCCCGG CGCGCGCACC GCCTGGCACA CCCACCCGCT CGGCCAGACC CTGATCGTCA CCGCCGGCCG CGGCCTCGCC CAAAGCTGGG GCGGAGAACT GCGCGAGATC CGCGCCGGCG ACGTGGTGTG GTTCCCGCCG GGTGAAAAGC ACTGGCATGG GGCAGCGCCC GATACGGGGA TGACCCATAT CGCCATTCAG GAAGCGCTCG ATGGAAAGGC GGTGGACTGG CTCGAGCATG TGACGGACGA GCAGTATGGG GGTGTGTAG
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Protein sequence | MEIFECGSRP STRGPAEYFT GSVRLDPAFE APSPARLRGA TVTFEPGART AWHTHPLGQT LIVTAGRGLA QSWGGELREI RAGDVVWFPP GEKHWHGAAP DTGMTHIAIQ EALDGKAVDW LEHVTDEQYG GV
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