Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0877 |
Symbol | |
ID | 5321715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 939006 |
End bp | 939485 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640789814 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001326567 |
Protein GI | 150396100 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.600163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGA CATTCGAGGT TTCCGACAAG CTTTTCGAGC TCTACCATCG CGTTCATCGG CTGGTAAACG AGTCCATGAC GGAGGAGGGC GTATCGCTTG CCCGAAGCAA GTTCCTGTTC TTCCTGAGCA AGCTCGGGCC CTGTCGGTCC ACGGACATAG CCTGTGCGCT GAACTTCGCC CCGCGCACCG TGACCGAAGC GATCGACGGG CTGGAACGCG ACCGTCTGGT CATGAGAAAA CCCGACCCCG AGGACCGCCG CGCCAAGATC GTCTCCATCA CCGAGACCGG CCGGGCCGTC CTTCAGGCAG CGGAACATCC GCGTAAACAG CTTATCGAAG AAATTTTTTC CGCGCTCGAT GACGAGCAAC TCGACCAGCT TTACGATATC GTCAGCAAAC TCGTCGAGAA GACCGACGAT ATTCGCAAGC GCAAGGAAGA GGCGGAAGCT GCCGAGGTCG CCGGCGCCCA CCAGTCTTGA
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Protein sequence | MKKTFEVSDK LFELYHRVHR LVNESMTEEG VSLARSKFLF FLSKLGPCRS TDIACALNFA PRTVTEAIDG LERDRLVMRK PDPEDRRAKI VSITETGRAV LQAAEHPRKQ LIEEIFSALD DEQLDQLYDI VSKLVEKTDD IRKRKEEAEA AEVAGAHQS
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