Gene Smed_0877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0877 
Symbol 
ID5321715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp939006 
End bp939485 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content59% 
IMG OID640789814 
ProductMarR family transcriptional regulator 
Protein accessionYP_001326567 
Protein GI150396100 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.600163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA CATTCGAGGT TTCCGACAAG CTTTTCGAGC TCTACCATCG CGTTCATCGG 
CTGGTAAACG AGTCCATGAC GGAGGAGGGC GTATCGCTTG CCCGAAGCAA GTTCCTGTTC
TTCCTGAGCA AGCTCGGGCC CTGTCGGTCC ACGGACATAG CCTGTGCGCT GAACTTCGCC
CCGCGCACCG TGACCGAAGC GATCGACGGG CTGGAACGCG ACCGTCTGGT CATGAGAAAA
CCCGACCCCG AGGACCGCCG CGCCAAGATC GTCTCCATCA CCGAGACCGG CCGGGCCGTC
CTTCAGGCAG CGGAACATCC GCGTAAACAG CTTATCGAAG AAATTTTTTC CGCGCTCGAT
GACGAGCAAC TCGACCAGCT TTACGATATC GTCAGCAAAC TCGTCGAGAA GACCGACGAT
ATTCGCAAGC GCAAGGAAGA GGCGGAAGCT GCCGAGGTCG CCGGCGCCCA CCAGTCTTGA
 
Protein sequence
MKKTFEVSDK LFELYHRVHR LVNESMTEEG VSLARSKFLF FLSKLGPCRS TDIACALNFA 
PRTVTEAIDG LERDRLVMRK PDPEDRRAKI VSITETGRAV LQAAEHPRKQ LIEEIFSALD
DEQLDQLYDI VSKLVEKTDD IRKRKEEAEA AEVAGAHQS