| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0872 |
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| Symbol | clpP |
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| ID | 5321710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 930911 |
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| End bp | 931537 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640789809 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_001326562 |
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| Protein GI | 150396095 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.323505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAAATC CAGTTGATAC GGCCATGGCG CTGGTGCCGA TGGTTGTTGA GCAGACCAAT
CGCGGTGAGC GATCCTACGA TATCTATTCG CGGCTGCTGA AGGAGCGCAT CATCTTTCTC
ACGGGTCCGG TCGAAGATCA CATGGCGACG CTTGTCTGCG CGCAGTTGCT GTTCCTCGAG
GCGGAAAATC CGAAAAAGGA AATCGCACTC TACATCAACT CGCCCGGCGG GGTCGTGACG
GCCGGCATGG CGATCTACGA CACGATGCAG TTCATTAAGC CTGCAGTTTC GACGCTCTGC
ATCGGTCAGG CGGCATCCAT GGGTTCGCTG CTGCTCGCGG CCGGACACAA GGACATGCGC
TTCGCAACGC CGAATTCCCG CATCATGGTG CACCAGCCTT CCGGCGGGTT CCAGGGGCAG
GCCTCCGACA TCGAGCGGCA TGCACGCGAC ATTCTCAAGA TGAAGCGCCG GTTGAACGAG
GTTTACGTCA AGCATTGCGG CCGCACCTAT GAGGAGGTGG AGCAGACGCT TGATCGCGAT
CACTTCATGA GTTCGGATGA AGCGCTCGAC TGGGGTCTGA TCGACAAGGT GATCACGTCG
CGCGATGCGG TCGAGGGCAT GGAATAG
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| Protein sequence | MRNPVDTAMA LVPMVVEQTN RGERSYDIYS RLLKERIIFL TGPVEDHMAT LVCAQLLFLE
AENPKKEIAL YINSPGGVVT AGMAIYDTMQ FIKPAVSTLC IGQAASMGSL LLAAGHKDMR
FATPNSRIMV HQPSGGFQGQ ASDIERHARD ILKMKRRLNE VYVKHCGRTY EEVEQTLDRD
HFMSSDEALD WGLIDKVITS RDAVEGME
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