| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0871 |
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| Symbol | |
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| ID | 5321709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 929076 |
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| End bp | 930638 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789808 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_001326561 |
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| Protein GI | 150396094 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0336385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTGGA TTGCACTTTC TCTTGCGGCG CTCTTTGGAC TCCTGCTTGC TGGCGTTCTT
TACGTGTATG GCTGGTTTGG CCGCCGACCA AGTATCGATC CAACCTTCGC GCTTCCCGTG
GAAGGGGACG AGACCGGTAT CGACAAGCAA TTAGCTCCGT TATTGGAGGC CGCCCGATCC
GGCGAGAACG CGGTCGCGCT CATTTCCGAC AACATCGAAG CTTTCGTGGC GCGGGCGCTT
TCGGCGCGCC GGGCAGGGCG CAGCCTCGAT CTGCAATATT ATTACTGGAA GGACGACCTG
ACAGGATTTC TTCTGACGCG CGAGGTCATC CGGGCGGCCG ATCGCGGTGT CCGCGTCCGC
CTGCTGCTCG ACGACGTCAA TGCAGGCATC CACGACCGTC TCTGCATTTC GCTCGATGCC
CATCCCAATG TCGACGTGCG CCTGTTTAAT CCGAGTCGGG CCCGAACGGA TCGCTTCCGT
CGCGGGTTCG AATTGGCGAT ACGTGCCTTC AGTGCGACAC GCCGGATGCA CAACAAGCTG
TGGATTGCCG ACGGCCGGCT GGCGATTTCC GGGGGACGCA ATATCGGCGA CGCCTATTTC
GACGCGGCCG AACTGGCGAA CTTCCGAGAC CTCGATGTCT GGATGGCCGG TCCGGTCGTC
GATCAGGCGA CGGCCATGTT CGACCTTTAC TGGAACAGTC CGTCGGTGCT GCCGATTGCG
GCGCTGAGAA CGCCGCGTAA GCATTTCCTT CCGGCGCTGA GAGAAGCGCT GGACCAGTTG
GCGCGCACGG CCGCCGGGCG CTTTTACCTG GAAAAGGTTC AGGATGCAGC CGCCGCGGGG
CCGGGGGCCT ACTGGGGCAG CCGCACCCTC TACCGAAGCG CGAATCTGCG CTTGGCGTTC
GATCCGCCGG AAAAGGCGCT GATGCAGAAG CGGCAGAACT GGTTGCTGCG CGAACTTTTC
CCGCTGATCA AAGGCGCGAA GCGCGATTTG CGGATCATCT CCCCCTATTT CATTCCTGGC
GTTGCGGGAA CGCGTGTTCT GGCGCTGCTC GCGGGGAAGG GTGCGAAGGT GGCAGTGCTG
ACGAACTCGC TCGCGGCAAC GGATGTCGCA GCGGTACATG GCGGTTACGT GAAATACCGC
AAGTGGCTGC TGGAAGGGAA AGTGGAGCTG TACGAGCTCA AGGAACGGGG GGACTTCTTC
GATCGTCATC GTATGTCGCT GTTCGGGGCG CGGAACGCCA GCCTGCACAC CAAGGCTTTC
GTCGTCGACG GCGTCTGCGG TTATGTGGGT TCCATGAATT TCGATCCGCG GTCCGCGTCG
CTCAACACCG AGATGGGGAT CGTCTTTTCC GATGAGGCGC TCGCCTCCGA GATCCAATCG
ATATTCGAGG AGGAGACGGC GCCGGAGAGA AGCTATCGCC TGATGCTGAA AGACGGCCGG
CTCGCCTGGC AAGACCGGAC GAACGGCGCG CTCAGGCTGT TGCGGCGTGA GCCGGATGCG
GGCCTTTTCC GAAGGCTGAT CGCCGGCGCG ATCCGTTTTC TGCCCTTGGA GTCGCAGCTT
TGA
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| Protein sequence | MSWIALSLAA LFGLLLAGVL YVYGWFGRRP SIDPTFALPV EGDETGIDKQ LAPLLEAARS
GENAVALISD NIEAFVARAL SARRAGRSLD LQYYYWKDDL TGFLLTREVI RAADRGVRVR
LLLDDVNAGI HDRLCISLDA HPNVDVRLFN PSRARTDRFR RGFELAIRAF SATRRMHNKL
WIADGRLAIS GGRNIGDAYF DAAELANFRD LDVWMAGPVV DQATAMFDLY WNSPSVLPIA
ALRTPRKHFL PALREALDQL ARTAAGRFYL EKVQDAAAAG PGAYWGSRTL YRSANLRLAF
DPPEKALMQK RQNWLLRELF PLIKGAKRDL RIISPYFIPG VAGTRVLALL AGKGAKVAVL
TNSLAATDVA AVHGGYVKYR KWLLEGKVEL YELKERGDFF DRHRMSLFGA RNASLHTKAF
VVDGVCGYVG SMNFDPRSAS LNTEMGIVFS DEALASEIQS IFEEETAPER SYRLMLKDGR
LAWQDRTNGA LRLLRREPDA GLFRRLIAGA IRFLPLESQL
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