Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0868 |
Symbol | |
ID | 5321706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 926286 |
End bp | 926627 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640789805 |
Product | protein of unknown function DUF861 cupin_3 |
Protein accession | YP_001326558 |
Protein GI | 150396091 |
COG category | [R] General function prediction only |
COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.470118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.846065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCATA TGCTGAAATT CGATTTGTCT TCGGTCGGGG CCGAGGTCGG CGCTCCGGCG CCGGACCGCC TGATTTCAGG AAATCCGGAG TTCCGCACCT GGAACCTCGA GGGGGCCGGA AATCTCTATG CGGGCATATG GGAGGCGACG CCTGGCAAGT GGCGGATCGT CTACGACGAA TGGGAATACT TCCACATCCT CTTCGGTCAC TCGATCGTGA CCGAAGAGGA TGGAGAGCCC CTTCACCTCA AAGCCGGCGA CAGTCTGGTG CTGAGACCCG GCTTCAAGGG AACCTGGGAA GTGGTTGAAA CGACTCGCAA GGACTACGTG ATCCGCCTTT GA
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Protein sequence | MSHMLKFDLS SVGAEVGAPA PDRLISGNPE FRTWNLEGAG NLYAGIWEAT PGKWRIVYDE WEYFHILFGH SIVTEEDGEP LHLKAGDSLV LRPGFKGTWE VVETTRKDYV IRL
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