Gene Smed_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0868 
Symbol 
ID5321706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp926286 
End bp926627 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content59% 
IMG OID640789805 
Productprotein of unknown function DUF861 cupin_3 
Protein accessionYP_001326558 
Protein GI150396091 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.470118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.846065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATA TGCTGAAATT CGATTTGTCT TCGGTCGGGG CCGAGGTCGG CGCTCCGGCG 
CCGGACCGCC TGATTTCAGG AAATCCGGAG TTCCGCACCT GGAACCTCGA GGGGGCCGGA
AATCTCTATG CGGGCATATG GGAGGCGACG CCTGGCAAGT GGCGGATCGT CTACGACGAA
TGGGAATACT TCCACATCCT CTTCGGTCAC TCGATCGTGA CCGAAGAGGA TGGAGAGCCC
CTTCACCTCA AAGCCGGCGA CAGTCTGGTG CTGAGACCCG GCTTCAAGGG AACCTGGGAA
GTGGTTGAAA CGACTCGCAA GGACTACGTG ATCCGCCTTT GA
 
Protein sequence
MSHMLKFDLS SVGAEVGAPA PDRLISGNPE FRTWNLEGAG NLYAGIWEAT PGKWRIVYDE 
WEYFHILFGH SIVTEEDGEP LHLKAGDSLV LRPGFKGTWE VVETTRKDYV IRL