Gene Smed_0864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0864 
Symbol 
ID5321702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp922502 
End bp923323 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content61% 
IMG OID640789801 
Productenoyl-CoA hydratase 
Protein accessionYP_001326554 
Protein GI150396087 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.281406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.242877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATG TCGTTTCATT CAGGAAAGAA GAACAGAGCG GACCGTTGCT ACGTGAGGTC 
AACAGCCCGG TCCTGCGTTT GACGCTCAAC AATCCGCCTG CCAACGTGCT TTCGATCGCC
TTGATGGAAG CCTTGCTGGC GGCGCTCGAG GAGGCGGCCG CCTCGAAGGA AATCAAGGTT
GTCGTGATCG CCGCGGCCGG CAAGCTTTTC TCCGCCGGCC ACGATCTCAA GGAAATGACC
TCCCATCGGG CCCACGCGGA CGGCGGACGG GCTTTCTTCG AGCGAACGAT GCGCCTGGCG
GCCGAAGTGA TGCTGACCAT TACCAGGCTG CCGCAGGCGG TCATTGCAGA AGTCGACGGT
CTCGCGACGG CCGCTGGGTG CCAGCTTGTC GCAAGTTGCG ACCTGGCGAT CTGCACCGAC
ACGTCCACCT TCTGCACCCC GGGTGTGAAC ATTGGCCTTT TCTGTTCGAC GCCGATGGTC
GCTCTGACAC GCGCGGCCCA TCGCAAGCAG GCGATGGAAA TGCTCCTGAC CGGTGAGCCG
ATAGATGCCG GGACAGCGAA GGAGTTCGGT CTCGTCAACC GCATCGTTCC TCAGCAATAT
CTGCGCCAGG TCATCGACAA ATATGCGTCG GTCATTGCCA CGAAGTCGCC GCAGGCACTG
AAGATCGGCA AGGAAGCCTT CTACCGGCAG GCGGAAATGC CGCTTGCCGA GGCTTACGAC
TTTGCAGTCG GCGTCATGGT CGAGAACATG CTCGCCCGTG ATGCCGAGGA GGGCATCGGC
GCCTTTCTCG GCAAGCGCAT GCCGGATTGG AAGGAAGACT AG
 
Protein sequence
MADVVSFRKE EQSGPLLREV NSPVLRLTLN NPPANVLSIA LMEALLAALE EAAASKEIKV 
VVIAAAGKLF SAGHDLKEMT SHRAHADGGR AFFERTMRLA AEVMLTITRL PQAVIAEVDG
LATAAGCQLV ASCDLAICTD TSTFCTPGVN IGLFCSTPMV ALTRAAHRKQ AMEMLLTGEP
IDAGTAKEFG LVNRIVPQQY LRQVIDKYAS VIATKSPQAL KIGKEAFYRQ AEMPLAEAYD
FAVGVMVENM LARDAEEGIG AFLGKRMPDW KED