| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0854 |
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| Symbol | |
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| ID | 5321692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 912695 |
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| End bp | 914824 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789791 |
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| Product | exopolysaccharide transport protein family |
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| Protein accession | YP_001326544 |
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| Protein GI | 150396077 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.298615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGCG GGCAGCAGGA TGTAGATATC GACCTCGGCG GGCTCTTCCG CGCCATCTGG
CAACGGCGCG TGCGCGTCCT GCTCGTCACT GTTGGGGCCG CTGCCGTCAG CTTCGCCGCC
GCCAGGATGG TCGCTCCCGA CTATCAAGGC GAGACCCGCG TTTTGATCGA ATCGCGTGAG
CCCGAGTTCA GCGGCAGCAA CCAAGTCTCG CAGAGCGGAT CCGACCGAAT GTTCGATGAA
TCGGGCATTC TCAGCCAGGT GCAGGTCCTG CGCTCGGCGG ACCTGATCAA GCAGGTCGCG
CGCAACATGA AACTGCACGA ACGCGAAGAA TTCGATCCCT CCGCCCGGCC TTCCGCCGCC
TCCGATCTCC TGGTGATGCT GGGTCTCAAG AAGAATCCCC TCGATCTTCC GCCCGAGGAA
CGGGTCCTCA AAGAGTTCAA TGAGAAGCTG CAGGTCTACC AGGTCGAAAA GTCGCGTGTG
ATCGCCATCG CCTTCACTTC GAAAGATCCG AAGCTTGCGG CCGCTATTCC GAACGAAATG
GCCGATGTCT ATCGCTCCCT GCAGAGCGGC GCCAAGCTCG ACTCCAACTC CGATGCAAGC
CGGTGGTTGG AACCGGAAAT CGCCAACCTG CGCGAGAAGG TGCGCGAGGC GGAGGCCAAG
GTTGCCATTT ACCGCGCGGA ATCGGGTCTG CTTCCGACCG GAGAGACGCA GAATTTTGCT
ACACGCCAGC TGACCGACAT TTCGACGGAG CTCGCGCGGG TGCGCGCGGA GCGTGCCAAT
GCGGCTGCCC GCGCCGAGGG TATGCGGACG GCGCTCGCGG ACGGTCGTCC GGCCGACACC
CTTGCCGACA TCGTCGGTTC GCCGATGATA CAGCGTCTCA AGGAAAGCCG CTCCAATGTT
CAGTCGCAGA TCGCCGATCT GTCGCCGGCG CTGCTCGACG GTCATCCGCG CTTGAAGGGG
CTCAAGTCGC AGCTGGAGGG GATCGAAGCG CAGATCCGGT CGGAGACGCG GAAGATTCTC
GCGAGCCTCG AAAACGAAGC GAAGGTCGGG CAATTGCGCG AACAGCAGCT CGTCCAGCAG
CTGAACACGC TCAAGGCGCA ATCGGCGCAG GCGGGCGAGG AGGAAGTGGG ACTTCGTGCG
CTCGAGCGCG AGGCGGCGGC ACAGCGCCAG TTGCTTGAAA CTTATCTTGC CCGTTATCGC
GAGGCCACCT CGCGCACTGT GGCGAATGCA ACTCCGGCCG ATGCACGCGT GATTTCGCGC
GCCGTCATCC CCACCAGCCA GAGCTTCCCC AAGGTGCTGC CGATAACGAT CGTCGCAGCC
TTTGCCAGCT TCCTCGTCAG TTGCGTCGTT ATCATGCTAA GGGAGCTTTT CAGCGGTCGC
GCGCTGAGGC CTGTTTCCAT ACCCGAAGCG TCGACCGCAG GTCAGCCCGC AGGAGAACCG
CCAGTTCCGG TTCTGGTCCA GCAGATTCCC GCGCCAATCC TCGTTTCGGC GATATCTGCG
GATGAGGAAG AAGGCCGGAG CGAAAACGAA GCACCGAACC ATGATTTTTC AATGGAGTCG
GTTGCCGAAC ATATTCGAGC CAAAGGCGTG CGGGTTGCCG TCTCGGTATC GCCGGGCGGC
GACGAAGGAT CCACTGCGAC CGTAATGCTG GCGCGCTTTC TGGCCGAAGA GGGGCAGAAA
GTCGTTCTGA TCGACCTTTC CGGTTCAGCC TGCCCGACGC GGCTCATGGC GCATTCGCAG
GATCTTGCCG GAGTCACGAA TTTGCTCATG GGGGAGGTCG CCTTTTCCGA GGCGATTCAC
TCAGACAGCT TGTCAGAAGC ACATATAATA CCCTGTGGCG ACGCCGACCC GCATGCGGCG
ATGCGCGGTA TCGACCGGCT GCGGATCATC GTCGATGCGC TCTCCAGTGC CTACGACCTC
GTCTTGATTG AATGCGGTTC GGCTGACGCA GACGCGGTCG CCAAGTTACG ACACGAGGGT
ACCGAGATCA TCCTGTCGGC ACCGTCGATC AGCAACGATC AGATTGTCGA GATGTTGATG
CGTTTCGGCG AAGCGGGATA TCGCGATGTC GTGCTTATGA CCGGGCAGGG GCAGAAAGGT
CCTGATTTTC CCGACCGCCG CGCGGCGTAG
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| Protein sequence | MSGGQQDVDI DLGGLFRAIW QRRVRVLLVT VGAAAVSFAA ARMVAPDYQG ETRVLIESRE
PEFSGSNQVS QSGSDRMFDE SGILSQVQVL RSADLIKQVA RNMKLHEREE FDPSARPSAA
SDLLVMLGLK KNPLDLPPEE RVLKEFNEKL QVYQVEKSRV IAIAFTSKDP KLAAAIPNEM
ADVYRSLQSG AKLDSNSDAS RWLEPEIANL REKVREAEAK VAIYRAESGL LPTGETQNFA
TRQLTDISTE LARVRAERAN AAARAEGMRT ALADGRPADT LADIVGSPMI QRLKESRSNV
QSQIADLSPA LLDGHPRLKG LKSQLEGIEA QIRSETRKIL ASLENEAKVG QLREQQLVQQ
LNTLKAQSAQ AGEEEVGLRA LEREAAAQRQ LLETYLARYR EATSRTVANA TPADARVISR
AVIPTSQSFP KVLPITIVAA FASFLVSCVV IMLRELFSGR ALRPVSIPEA STAGQPAGEP
PVPVLVQQIP APILVSAISA DEEEGRSENE APNHDFSMES VAEHIRAKGV RVAVSVSPGG
DEGSTATVML ARFLAEEGQK VVLIDLSGSA CPTRLMAHSQ DLAGVTNLLM GEVAFSEAIH
SDSLSEAHII PCGDADPHAA MRGIDRLRII VDALSSAYDL VLIECGSADA DAVAKLRHEG
TEIILSAPSI SNDQIVEMLM RFGEAGYRDV VLMTGQGQKG PDFPDRRAA
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