| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0843 |
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| Symbol | |
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| ID | 5321681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 901594 |
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| End bp | 902373 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789781 |
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| Product | carboxymuconolactone decarboxylase |
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| Protein accession | YP_001326534 |
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| Protein GI | 150396067 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.536951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.096524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC TAATCGCCCC GCTCATAGGA GTTATGATGA TGACCGCCTC GAACGCAGGG
GCTCAACAGC CCAATGTTGA AGGTCGCCGT TTCTCGCCCG ATCAGGTTCG CTCGGTGGCG
CCCGCCCTCG AGCAGTATAC GCAGCAACGC TTGTATGGCG ACGTCTGGCA GCGCCCCGGC
CTCAATCGGC GCGATCGCAG CCTTGTGACG ATCGCCGCGC TGATTGCGCG GGGAGAAGCC
CCGGCTCTCA CCTACTACGC CGATCAAGCG CTTGAGAACG GAGTGAGGCC TTCCGAGATC
TCGGAGACGA TCACGCATCT TGCCTATTAT TCCGGCTGGG GAAAAGCCAT GGCCACGATC
GGTCCCGTGA GCGAAGCCTT CGCCAAGCGC GGCATCAGTC AGGATCAGCT CGCTGCCGTC
GAATCCACGC CGTTGCCGCT GGACGAAGAG GCGGAAACAC AACGCGCAAC CACCGTCGGC
AACCAGTTCG GCAGCGTTGC CCCCGGCCTC GTTCAGTACA CGACGGACTA TCTTTTCCGC
GACCTATGGC TGCGCCCCGG CCTGGCGCCA CGCGATCGCA GCCTTGTCAC GGTCGCCGCA
CTGATCTCGG TTGGCCAGGT CGAGCAGATC ACCTTTCACC TGAACAAAGC CCTGGACAAT
GGGCTGACCG AAGAGCAGGC CGCCGAAGTC ATCACCCATC TGGCTTTCTA CGCAGGCTGG
CCCAACGCGA TGTCGGCGCT GCCGGTGGCG AAGGCCGTCT TTGAAAAGCG GCGCGGCTAA
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| Protein sequence | MKRLIAPLIG VMMMTASNAG AQQPNVEGRR FSPDQVRSVA PALEQYTQQR LYGDVWQRPG
LNRRDRSLVT IAALIARGEA PALTYYADQA LENGVRPSEI SETITHLAYY SGWGKAMATI
GPVSEAFAKR GISQDQLAAV ESTPLPLDEE AETQRATTVG NQFGSVAPGL VQYTTDYLFR
DLWLRPGLAP RDRSLVTVAA LISVGQVEQI TFHLNKALDN GLTEEQAAEV ITHLAFYAGW
PNAMSALPVA KAVFEKRRG
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