| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0839 |
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| Symbol | |
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| ID | 5321677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 898469 |
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| End bp | 899362 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789777 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001326530 |
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| Protein GI | 150396063 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0678785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCG ATGAACTGGG TGACCTGCTG GCCTTTCTGG CCGTTGCCGA AGAGAAGAGC
TTCACCAGGG CTGCTGCAAG GCTCGGTACT TCGCAATCCT CGCTCAGCCT CATTCTCAAG
CGTCTGGAGG CCCGTCTGGG CGTCCGCCTG CTTACACGCA CGACGCGAAG CCTGGCTCCG
ACGAACGCAG GAGAACAACT GCTGGCCACG TTAGGTCCGG CGCTCGGTTC TATAGAAGCC
CAGTTGTTGG CGCTCGGGGA ATTCAGGGAC AGGCCGGCAG GAAGTTTCAG GATTACTGCC
GGCCAGCACG CGATCGATAC GATCCTCTGG CCGAAGCTCG CGCCATTTCT TCTTGAGTAC
CCCGACATCA AGGTCGAGCT GGTTGCCGAG TCCGCTCTGA CGGACATCGT GACTGAACGG
TTCGACGCCG GCGTCCGACT GGGCGACCAG GTCGAAAAGG ACATGATCGC GGTCAGGATT
GGCCCGCTGG CAAGGATGAT CGTCGTGGCG GCTCCATCCT GCTTCGTGGA TCGTGCTCGA
CCGCAGGTAC CGCAGGATCT GACGGGACAC CGCTGCATTA ACCTTCGACT GCCAAGCTAC
GGCGGCTTCT ACGCGTGGGA GTTCGAACGT GATGGACATG AGGTCCGCGT CAGGGTTGAC
GGCCAGGTGG CCTTCAACGG GGTACCGCAG CTCGTGAATG CAGCACTGGA CGGTTTCGGA
CTCGCCTATG TCCACGAGGA TGTCGTCCGG GAGCATCTCA AGGACGGGCG GCTTGTGCAG
ATACTCGGAG ACTGGACTCC TCCGTTTCCG GGCTACCACC TCTACTACCC ATCCCGCCGA
CATCCCGCGC CAGCGTTCAC CCTGCTGGTG GAGGCGCTGA GACATCAAAC ATGA
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| Protein sequence | MQRDELGDLL AFLAVAEEKS FTRAAARLGT SQSSLSLILK RLEARLGVRL LTRTTRSLAP
TNAGEQLLAT LGPALGSIEA QLLALGEFRD RPAGSFRITA GQHAIDTILW PKLAPFLLEY
PDIKVELVAE SALTDIVTER FDAGVRLGDQ VEKDMIAVRI GPLARMIVVA APSCFVDRAR
PQVPQDLTGH RCINLRLPSY GGFYAWEFER DGHEVRVRVD GQVAFNGVPQ LVNAALDGFG
LAYVHEDVVR EHLKDGRLVQ ILGDWTPPFP GYHLYYPSRR HPAPAFTLLV EALRHQT
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