| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0831 |
|---|
| Symbol | |
|---|
| ID | 5321668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 893328 |
|---|
| End bp | 893861 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640789768 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_001326522 |
|---|
| Protein GI | 150396055 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.087298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0939438 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA GTCCGGATGC TTTCCGCACC ATCAGTGAGG TCGCGGACGA ACTCGATCTC
CCCCAGCACG TGCTTCGTTT CTGGGAAACC AGGTTTCAGC AGATCAAGCC GATGAAGCGC
GGTGGCGGGC GGCGGTACTA TCGCCCCGAA GACGTAGACC TGCTCAAAGG CATCCGCCAT
CTCCTTTACG ATCATGGCTA TACAATCAAA GGCGTACAAA AGCTTTTGAA GGCCAATGGG
AACAAGTTCG TCGCCGCGAT CGCCAGCGGC GATCTTGCAA CCGTCGAGGC GCTTGCCGCC
TCCAGCAACG AAGAACCGCT TCCGCCCAAA GCGGGCGTCG TGGAGGAGGA TCAGATCGTC
GGTCGCCCCA AGGCACCGGC GAGCCGGCGC TTCTTTTCTT TTACTGGCGG TGGCGACGAT
TCCGAGATTT CGATCGGCGG CAAGACATCG GTAGGCAAGG AGGACAGGGC GCTGCTACAG
GAGGCGCTTT ACGACCTCCT TGAATGCAAG CGCCTGCTCG ATCAGGTGCG GTGA
|
|---|
| Protein sequence | MEKSPDAFRT ISEVADELDL PQHVLRFWET RFQQIKPMKR GGGRRYYRPE DVDLLKGIRH
LLYDHGYTIK GVQKLLKANG NKFVAAIASG DLATVEALAA SSNEEPLPPK AGVVEEDQIV
GRPKAPASRR FFSFTGGGDD SEISIGGKTS VGKEDRALLQ EALYDLLECK RLLDQVR
|
|---|
| |