Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0829 |
Symbol | |
ID | 5321666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 891795 |
End bp | 892766 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640789766 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_001326520 |
Protein GI | 150396053 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.374194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.100717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTT CTGTCGTGCG CGGCTTCGGG GCAGCACTGC CGAAGCGAGT GATGACCAAT AAGGAAATGG AATCCAAGGT CGACACGTCC GACGAATGGA TTGTGCAGCG GACCGGCATC CGGCAGCGCT ATATCGCAGG CGACGGCGAG ACGACTGCCT CCCTCGGGGA GGCGGCGGCA CGCGCGGCGC TCGAGAGAGC CGGACTGACG CCTGATGACA TCGATCTGAT CATCGTCGCG ACGTCGACTC CGGACAACAC CTTTCCTGCA ACGGCGGTCA ACATTCAGAA TCGCCTCGGC ATGCGTCACG GTGCGGCATT CGATATGCAG GCCGTCTGTT CCGGCTTCGT CTATGCCGTC ACGACTGGCG ACGCCTATAT TCGCGGCGGC CTCGCCACAC GCGTGCTGGT CATCGGCGCC GAGACTTTTT CGCGTATTCT CGACTGGACG GACCGGACCA CCTGCGTTCT CTTCGGCGAC GGCGCCGGCG CCATCGTCCT CGAAGCGCAG GAGGGTGCCG GGACGAAAGC CGACCGCGGC GTTCTGACGG CGCAACTGCG CTCCGACGGC GCCCATGGCG ACAAGCTTTA TGTCGATGGC GGGCCGTCCA CGACCGGTAC AGTCGGCCAT CTCCGGATGG AAGGGCGCGA GGTCTTCAAG CACGCGGTGG GCATGATCAC CGACGTAATC GAAGCGGCTT TCGAAGCCAC AGGCACCACG GCGGACGACA TCGACTGGCT CGTTCCGCAC CAGGCGAACC GCCGCATCAT CGAGGGATCG GCCAAAAAAC TCGGGATCCC TCTCGAAAAG GTTGTGGTTA CCGTCGACCT TCATGGAAAT ACCTCTGCGG CGTCGATTCC GCTCGCGCTT GACGCCGCCG CTACCGACGG CCGTATCAAG AGGGGCGACC TTGTAATGCT CGAAGCCATG GGCGGAGGCT TCACCTGGGG CTCCGTTTTA CTGCGCTGGT AA
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Protein sequence | MIRSVVRGFG AALPKRVMTN KEMESKVDTS DEWIVQRTGI RQRYIAGDGE TTASLGEAAA RAALERAGLT PDDIDLIIVA TSTPDNTFPA TAVNIQNRLG MRHGAAFDMQ AVCSGFVYAV TTGDAYIRGG LATRVLVIGA ETFSRILDWT DRTTCVLFGD GAGAIVLEAQ EGAGTKADRG VLTAQLRSDG AHGDKLYVDG GPSTTGTVGH LRMEGREVFK HAVGMITDVI EAAFEATGTT ADDIDWLVPH QANRRIIEGS AKKLGIPLEK VVVTVDLHGN TSAASIPLAL DAAATDGRIK RGDLVMLEAM GGGFTWGSVL LRW
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