| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0824 |
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| Symbol | hppA |
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| ID | 5321661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 886442 |
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| End bp | 888577 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789761 |
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| Product | membrane-bound proton-translocating pyrophosphatase |
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| Protein accession | YP_001326515 |
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| Protein GI | 150396048 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3808] Inorganic pyrophosphatase |
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| TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.241185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.154446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATAC TATTGGGCGT GATCGCATGC GGGTTGCTTT CGGTGGTCTA TGCCATCTGG
GCGACACGGT CGGTGCTTGC CGCCGACCAG GGGAATGCCC GCATGCAGGA AATCGCAGGC
TTTATCAGAG AGGGGGCGCA AGCCTACCTC GCGCGTCAGT ACACAACCAT CGCCTTCGTC
GGTGTCGTCG TTTTCATAGC CGCATGGGTT CTGCTCTCGG GTGCGGCCGC CATCGGCTTC
CTGATCGGTG CGGTGCTCTC GGGTGCCGCG GGCTTCATCG GCATGCATGT TTCGGTCAGA
GCCAACGTCC GCACGGCCCA GGCCGCTTCG GTCAGTCTTG CCTCCGGTCT GGACATCGCT
TTCAAATCCG GCGCCATCAC CGGCATGCTG GTTGCGGGCC TCGCTCTCCT GGGCGTCTCG
GTCTATTACC TCATCCTCAC GGCAGGGCTT GGGCATGAGC CGGCCTCGCG CGAAGTCATC
GATGCGCTTG TCGCGCTGGG TTTCGGGGCG TCGTTGATCT CGATCTTCGC CCGTCTGGGC
GGCGGCATCT TCACGAAAGG CGCCGATGTC GGCGGCGACC TCGTCGGCAA GGTCGAAGCA
GGGATCCCCG AGGATGATCC GCGCAACCCG GCGACGATCG CCGACAATGT CGGCGACAAT
GTCGGCGACT GCGCAGGCAT GGCAGCGGAC CTCTTCGAGA CCTATGCGGT CTCTGTCGTG
GCGACCATGG TACTTGCGTC GATCTTCTTC GCAGGTGCCC CTGTGCTGGC AACCGTCATG
ACCTATCCGC TGGCGATTTG CGCGGCCTGC ATCATCACCT CGATCATCGG CACCTTCTTC
GTCAAGCTCG GCACCAATGG TTCCATCATG GGGGCGCTCT ATCGCGGGCT GATCGTGACG
GGCGCGCTTT CGATCCTTGG TCTTGGCGCA GCGACGTCGC TGACGATCGG ATGGGGCTCG
ATCGGAACGG TCGCGGGCAT GGATATCACC GGCTGGAACC TGTTTCTCTG CGGTATCATC
GGTCTGATCG TCACGGCACT GATCGTCGTG ATCACCGAAT ATTATACGGG AACGAACAAG
CGACCGGTGA ACTCGATCGC GCAAGCCTCG GTCACCGGCC ACGGCACCAA TGTGATCCAG
GGTCTTGCCG TATCGCTCGA GTCGACCGCC TTGCCGGCCA TCGTCATCGT GGCCGGCATC
ATCTCGACAT ACCAGTTTGC CGGCCTCTTC GGGACGGCCA TCGCGGTGAC CGCGATGCTC
GGCCTTGCCG GCATGATCGT AGCGCTCGAC GCCTTCGGGC CCGTGACGGA CAATGCCGGC
GGTATCGCCG AGATGTCGCA TCTGCCACCA GAGGTGCGCA AGGCGACCGA CGCATTGGAC
GCCGTCGGCA ACACCACCAA GGCCGTGACG AAAGGTTATG CGATCGGCTC CGCGGGTCTC
GGCGCCCTGG TGCTCTTCGC CGCCTATTCC AACGATCTTG CCTATTTTGC CGCCAATGGT
GACAAGCATC CCTATTTCGC CGACGTCGGG ACGATTTCCT TCGACCTGTC GAATCCTTAC
GTTGTCGCCG GGCTGATCTT CGGCGGCCTC ATCCCCTATC TGTTCGGCGG TATAGCCATG
ACCGCCGTCG GAAGGGCAGG GAGCGCCGTC GTCGAGGAGG TTCGTCGTCA GTTCAAGGAG
AAGCCGGGCA TCATGGAAGG CAAGGACCGG CCGGATTATG GCCGCGCCGT CGACATGCTG
ACCAAGGCGG CGATCCGTGA AATGATCATT CCGTCGCTGC TCCCGGTGCT TGCGCCTATC
GTCGTTTACT TCGGCGTGCT GCTGATCTCC GGCTCGAAGG CTTCTGCCTT CGCGGCGCTT
GGTGCCTCGC TCCTCGGCGT TATCGTCAAC GGCCTTTTCG TAGCCATATC GATGACATCG
GGTGGCGGTG CCTGGGACAA TGCGAAGAAG AGCTTCGAGG ATGGCTTTGT CGATCGCAAC
GGTACCCGCC ACATGAAGGG GTCTGACGCG CACATGGCCT CGGTGACGGG CGACACCGTT
GGCGATCCCT ACAAGGACAC GGCCGGTCCA GCCGTCAATC CCGCGATCAA GATCACCAAC
ATTGTCGCGC TCCTGCTGCT CGCCGTGCTC GCTTGA
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| Protein sequence | MTILLGVIAC GLLSVVYAIW ATRSVLAADQ GNARMQEIAG FIREGAQAYL ARQYTTIAFV
GVVVFIAAWV LLSGAAAIGF LIGAVLSGAA GFIGMHVSVR ANVRTAQAAS VSLASGLDIA
FKSGAITGML VAGLALLGVS VYYLILTAGL GHEPASREVI DALVALGFGA SLISIFARLG
GGIFTKGADV GGDLVGKVEA GIPEDDPRNP ATIADNVGDN VGDCAGMAAD LFETYAVSVV
ATMVLASIFF AGAPVLATVM TYPLAICAAC IITSIIGTFF VKLGTNGSIM GALYRGLIVT
GALSILGLGA ATSLTIGWGS IGTVAGMDIT GWNLFLCGII GLIVTALIVV ITEYYTGTNK
RPVNSIAQAS VTGHGTNVIQ GLAVSLESTA LPAIVIVAGI ISTYQFAGLF GTAIAVTAML
GLAGMIVALD AFGPVTDNAG GIAEMSHLPP EVRKATDALD AVGNTTKAVT KGYAIGSAGL
GALVLFAAYS NDLAYFAANG DKHPYFADVG TISFDLSNPY VVAGLIFGGL IPYLFGGIAM
TAVGRAGSAV VEEVRRQFKE KPGIMEGKDR PDYGRAVDML TKAAIREMII PSLLPVLAPI
VVYFGVLLIS GSKASAFAAL GASLLGVIVN GLFVAISMTS GGGAWDNAKK SFEDGFVDRN
GTRHMKGSDA HMASVTGDTV GDPYKDTAGP AVNPAIKITN IVALLLLAVL A
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