| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0823 |
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| Symbol | |
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| ID | 5321660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 885017 |
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| End bp | 886243 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640789760 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001326514 |
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| Protein GI | 150396047 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.735993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.261534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGCCG AGACGGCAGG CACGGGGACG GTTCTGGGCG AGGCGCGCCG CAACGTCCAG
TTGCTCACGG TGGCTCAGGC GCTGCTCGGG GTTGTCGGAC CAATCAGTTT TGCCGTCGGC
GGCGTTGCCG GGCACCAGTT GCTCGGCGAA GACAAGTCGC TCGCGACGGC GCCGCTCACC
GCCTACAATC TCGGGATGGC CCTCGGCGTC GTGCTCGTTG CCGTTTTGTC GCGACTGATT
GGACGGCGCT TCGCCTTCAT GGCGGGAGCG TCGATCGCCG CGCTTGGCGG CTTGCTCGCA
ACGGCCGCGC TTTTCCGCGA GAGTTTCTGG TTCTTCGCCT GCGGTCTCGC GGTTCTCGGA
GCTTCCAACG GCTTCACCCA GAAACTTCGC TTTGCCGCTG CCGACGCCTC GCCTCCCTTC
TATAAGGCAA AGGCGATTTC CTGGATTCTG GGCGGCGGCA TCGTCTCGGC TGTCCTAGGT
CCGCAGATCG TGATTTTCGC GGGCGACTAC TTCGCGCCCG TATGGTTTGC CGGTGCTTTC
GTCGCTCTCG TGCCGGTCTG CATCGTCGCC CTCTTCTTCT TCATGCCGCT CCGGTTGCCG
GACCACACAA AGGCGTCCGC CCCGCGTGAC CTGCCGCCAG CGCGCCCGCT GCGCGAGATT
GCCGGCAGCC AACGTTTCCT GACGGGAATG ATCTGCGGGA TCTCCAGCTA TGTCCTGATG
ACTTTCATGA TGACGGGTGC GCCTGTCGCC ATGGTCGTCG GTTGCGGCTT CTCGAGCGAC
CTCGCCACTC TCGGAATCCA GTGGCACGTG CTCGCGATGT TCGCTCCGAG TTTCGTGACG
GGCTGGCTGA TCAGCCGCTT CGGTGCCGAA CGCATCGTCG CCTGTGGTCT CCTTCTGCTG
ATGGCCTGTG CTGCCGTGGC ACACCTCGGT GTGGCACTCT GGAATTTCTG GGGTGCACTG
TCGTTGCTCG GCCTCGGCTG GAATTTCGGC TTCATCGGTT CGACGGCGAT CGTCGCGCAG
AGCTACCGGT CACATGAGGC CGACAAGGTC CAGGCCTTTC ACGACATCGT TCTCTTCTCG
GCCGTCGCCG GTTCCTCCTT CGCCTCCGGT AAGGTTCTCT CCGCCTATGG TTGGGACATG
CTGAGCGCGG CTGTGTGGCC GGTTGCAGGC TTTTGCCTGC TTCTCCTTCT ACCGTTGATG
CGCACGCGCA AGCGAGCCGC TGCCTGA
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| Protein sequence | MVAETAGTGT VLGEARRNVQ LLTVAQALLG VVGPISFAVG GVAGHQLLGE DKSLATAPLT
AYNLGMALGV VLVAVLSRLI GRRFAFMAGA SIAALGGLLA TAALFRESFW FFACGLAVLG
ASNGFTQKLR FAAADASPPF YKAKAISWIL GGGIVSAVLG PQIVIFAGDY FAPVWFAGAF
VALVPVCIVA LFFFMPLRLP DHTKASAPRD LPPARPLREI AGSQRFLTGM ICGISSYVLM
TFMMTGAPVA MVVGCGFSSD LATLGIQWHV LAMFAPSFVT GWLISRFGAE RIVACGLLLL
MACAAVAHLG VALWNFWGAL SLLGLGWNFG FIGSTAIVAQ SYRSHEADKV QAFHDIVLFS
AVAGSSFASG KVLSAYGWDM LSAAVWPVAG FCLLLLLPLM RTRKRAAA
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