Gene Smed_0812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0812 
Symbol 
ID5321649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp875350 
End bp876363 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content62% 
IMG OID640789749 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_001326503 
Protein GI150396036 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.673784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA GGACAAATCT TGTGGACAGG ATCACCGGGC ACCGCCGCAT GCGCCGCAAT 
CGCAAGGCGG ACTGGACGCG CCGGCTGGTC CAGGAGAACC GTTTGACGGT TGACGACCTG
ATCTGGCCGA TCTTCGTCGT GCCCGGCAGC GGCATCGTGG AGCCGATAGA TGCAATGCCG
GGGGTTAACC GGATGAGCGT CGACAAGGCG GTCGAGGCGG CGAAGGAGGC AGCCGATCTC
GGCATTCCGG CGATCGCAAC CTTTCCCAGT ATCGACATGG CGCTCCGCGA TGAGACCGGA
TCGAACAGTC TCAAGGCCGA CAACCTGATC AACCAGGCGA CGCGGGCGAT CAAGAAAGCC
GTTCCAGACA TCGGCATCAT CACCGACGTT GCGCTCGATC CGTTCACCAG CCACGGCCAT
GACGGCATCC TGCGCGATGG CCAGATCGTC AATGACGAAA CGGTGGAATC AATCGCCAGG
GCGGCGGTCA TTCAGGCGGA GGCAGGTTCC GATATCATCG CGCCCTCCGA TATGATGGAT
GGGCGGATCG GCGCGATCCG CGAGGTGCTC GACGCGGCCG GGCACCAGAA TGTCGGCATT
ATGTCCTATG CAACGAAATT CGCGTCCGCT TTCTATGGAC CTTATCGCGA GGCGATCGGC
ACCGGGGGCC TGCTCAAGGG CGACAAGAAG ACCTATTACA TCGATCCGGC GAATGGGACC
GAGGCGATAC GCGACGCAGC ACTCGATGTG GAGGAAGGCG CGGACATGCT GATGGTGAAG
CCCGGCCTGC CCTATCTCGA CATCTGTTGG CGAATGAAGG AAGCCTTCGG CCTGCCGGTC
TTCGCCTATC AGGTTTCCGG TGAGTACGCC CAGATCAAGG CGGCGGCAGC CAATGGCTGG
ATCGACGGCG AGCGGGTGAT GGTGGAGACG CTGCTGGCCT TCAAGCGGGC CGGCTGCGAC
GGGATCCTCA GCTATTTCGC CCTCGAAACG GCGCGCATCC TCGCCAAGCG CTAG
 
Protein sequence
MNDRTNLVDR ITGHRRMRRN RKADWTRRLV QENRLTVDDL IWPIFVVPGS GIVEPIDAMP 
GVNRMSVDKA VEAAKEAADL GIPAIATFPS IDMALRDETG SNSLKADNLI NQATRAIKKA
VPDIGIITDV ALDPFTSHGH DGILRDGQIV NDETVESIAR AAVIQAEAGS DIIAPSDMMD
GRIGAIREVL DAAGHQNVGI MSYATKFASA FYGPYREAIG TGGLLKGDKK TYYIDPANGT
EAIRDAALDV EEGADMLMVK PGLPYLDICW RMKEAFGLPV FAYQVSGEYA QIKAAAANGW
IDGERVMVET LLAFKRAGCD GILSYFALET ARILAKR