Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0802 |
Symbol | aspS |
ID | 5321639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 863504 |
End bp | 865291 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789739 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_001326493 |
Protein GI | 150396026 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.336028 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCGTT ACCGCAGCCA CACCTGTGCC GCCCTCCGCA AGTCGGATGT CGGCTCCACC GTTCGCCTTT CCGGCTGGGT TCACCGCGTC CGCGATCACG GCGGCGTGCT CTTCATCGAT TTGCGCGACC ATTATGGCAT GACCCAGGTC GTCGCCGATC CGGATTCGCC GGCCTTCAAA GCGGCCGAGA CGGTGCGCGG CGAATGGGTC ATTCGCGTCG ACGGTGCCGT CAAGGCGCGC ACCGACGAGA CGGTCAACCG GAACATGCCT ACGGGTGAGG TCGAGCTTTA TGCCCGCGAG ATCGAGGTGC TCTCGGCCGC CAAGGAACTG CCGCTGCCGG TTTTCGGCGA GCCGGACTAT CCCGAAGACG TGCGCCTGAA ATACCGCTTC CTCGATCTGC GCCGCGAGAC GCTGCACAAG AACATCGTCA GGCGCACCGA AATCATCGCC GCCATGCGGC GCCGGATGAG CGACATAGGC TTCACCGAAT ATACGACCCC GATCCTGACG GCCTCGTCGC CGGAAGGCGC GCGCGACTTC CTGGTGCCCA GCCGCATCCA CCCCGGAAAT TTCTATGCGC TGCCGCAGGC CCCTCAGCAG TACAAGCAGC TCCTGATGGT TGCGGGCTTT GACCGGTACT TCCAGATTGC TCCGTGTTTC CGCGACGAGG ATCCGCGCGC CGACCGTCTG CCCGGCGAGT TCTATCAGCT CGATCTCGAA ATGAGCTTCG TCGAACAGGA GGACGTTTGG GACGCCATGG AGCCGATGAT CCGGGCGATC TTCGCGGATT TCGCCGGAGG CAAGCCGGTG ACGGACAAGT TCCCGCGCAT TCCCTATGAC GCGGCGATCC GCAAATATGG TTCCGATAAG CCGGACCTGC GCAACCCGAT CGAGATGCAG GAGGTTACGG AGCATTTCGC CGGTTCCGGC TTCAAGGTCT TCGCCAATAT GATAGCCTCC AACCCGAAGG TGGAGATCTG GGCCATTCCC GCCAAGACCG GCGGCTCTCG CGCTTTCTGC GACCGTATGA ACGCCTGGGC TCAAAGCCAG GGTCAGCCGG GCCTCGGATA TATATTCTGG CGCAAGGAAG GCGAGAAGCT CGAAGGTGCC GGTCCGCTCG CCAAGAATAT CGGCGAGGAG CGGACCGACG CCATCCGCAC GCAACTCGGT CTCGGGGACG GCGACGCCTG CTTCTTCGTT GCCGGGGAAC CGGCGAAATT CTACAAGTTC GCCGGCGAAG CCCGCACAAG GGCAGGCGAG GAATTGAACC TCGTCGACCG TGAGCGTTAC GAGCTGTGCT GGATCGTGGA CTTCCCGTTC TATGAATGGA ACGAGGAGGA AAAGCGCGTC GATTTCGCCC ACAACCCGTT CTCGATGCCG CAGGGTGGCC TCACTGCTCT TTCGAGCGAC GATCTCCTGT CGATCAAGGC TTTCCAGTAC GACATGGTGT GCAACGGCTT CGAGATCGCC TCGGGTTCGA TCCGTAACCA GTCGCCGGAA CTCATGGTGA AGGCTTTCGA GAATGTCGGG CTCAGCCAGG CTGACGTGGA AGAGCGGTTC GGTGGTCTCT ACCGCGCGTT CCAATATGGT GCCCCGCCGC ATGGCGGCAT GGCTTTCGGC ATCGATCGCA TCGTCATGCT GCTGGTCGGC GCCAAGAATT TGCGCGAAAT CTCTCTGTTT CCGATGAACC AGCAGGCTCA GGACCTGCTG ATGGGGGCCC CTTCGCCGGC GGAGCCGGCG CAGCTCAGGG AACTGGCGAT CCGACCGGTA CCGCAGAAGA AGGATTGA
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Protein sequence | MHRYRSHTCA ALRKSDVGST VRLSGWVHRV RDHGGVLFID LRDHYGMTQV VADPDSPAFK AAETVRGEWV IRVDGAVKAR TDETVNRNMP TGEVELYARE IEVLSAAKEL PLPVFGEPDY PEDVRLKYRF LDLRRETLHK NIVRRTEIIA AMRRRMSDIG FTEYTTPILT ASSPEGARDF LVPSRIHPGN FYALPQAPQQ YKQLLMVAGF DRYFQIAPCF RDEDPRADRL PGEFYQLDLE MSFVEQEDVW DAMEPMIRAI FADFAGGKPV TDKFPRIPYD AAIRKYGSDK PDLRNPIEMQ EVTEHFAGSG FKVFANMIAS NPKVEIWAIP AKTGGSRAFC DRMNAWAQSQ GQPGLGYIFW RKEGEKLEGA GPLAKNIGEE RTDAIRTQLG LGDGDACFFV AGEPAKFYKF AGEARTRAGE ELNLVDRERY ELCWIVDFPF YEWNEEEKRV DFAHNPFSMP QGGLTALSSD DLLSIKAFQY DMVCNGFEIA SGSIRNQSPE LMVKAFENVG LSQADVEERF GGLYRAFQYG APPHGGMAFG IDRIVMLLVG AKNLREISLF PMNQQAQDLL MGAPSPAEPA QLRELAIRPV PQKKD
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