| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0801 |
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| Symbol | |
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| ID | 5321638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 861962 |
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| End bp | 863197 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789738 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001326492 |
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| Protein GI | 150396025 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.419426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGA TCCGCCCGCT CATCCCGCTG CTCGTCACCG CAGGCATACT GATCGGCGGC
AACGGGCTGC AGGGCACCTT CATTTCATTG AGAGCGCTGG ACGAGGGGTT CTCGACCTCG
CTCATCGGCG TGGTCGGCGC CGGCTACAAT ATCGGGTTCG CGATCGGCTG CATCTACGTC
ACCCGCATCC TCCGCGCGAT CGGTCACATC CGCACCTTTT CGGCAATGGC GGCCATAGCC
TCGGCTGCCG CGATCTCCAT GGTTCTCATT ATCGATCCCT GGTTCTGGTT CCTGATGCGA
CTCGTCGCCG GGATCTGCTT CGCAAGCCTC TTCGCCACGG TGGAGAGCTG GTTGAATGCC
AGCGTCACCA ACGCCAACAG GGGACGCACA TTGTCGGTCT ACCGTCTGGT CGATCTCGGT
TCGGTCACAG CGGCGCAATA CGCCATACCC GGCATCGGCA TCGGCGGGTT TGAGCTCTTT
GCGATCATTT CCATGGCGCT GACGCTCTCG CTCGTGCCGA TTTCCTTCGC CGACAGATCG
AGCCCGGTCA CTCCGGAAGC GATCCGATTC GACGTCAAGA CGCTCTGGAA CATCTCGCCG
CTGGCCACCA TTGGCTGCAT CGTCGTGGGC CTGACCAATG CCGCATTCCG CTCGCTCGGC
CCGATCTATG CGCAGGAGAT CGGGCTTTCG GTAACGGCAA TCGCGACCTT CATGAGCGCG
GGCATCATCG GCGGCGTCGT GTTGCAATAT CCCCTAGGCT ACTACTCCGA CCGGATCGAC
CGCAGGCTGA TCATCCTGCT CGCAACCTTC GGCTCCCTGC TTGCGGGCCT CTTCCTCGCC
TTCGGCGCCG GCAGCGACGA GTGGCTGAAC TTCGCCGGTA TCTTTGCCTT CGGCGCCTTC
GCTATGCCGC TATTTTCGCT ATGCTCGGCA CAAGCCAACG ACCATGCGGC TGAAGGCCAG
CATGCGCTGG TTTCGGCAGG CATGCTCTTC TTCTGGTCGC TCGGAGCTAT TATCGGGCCG
CTCTTCGCAT CCTTCCTGCT CGAGATATTC GCCCCGCAGG TGCTTTTCAT CTACACGGCC
GCGATCCTGG GGGCTTTCAT GCTCTACACA CTCTTGCGCA TGACTGCGCG TAAGCCGGTT
CCAACCGAGG AACGGTCGAT GCGCTTTCGC AATCTCCTTC GCACATCGTC CTTCTTCAAC
AAGCTTGCCG GCGGCCACGC GCGAAAAGAG CCGTGA
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| Protein sequence | MSQIRPLIPL LVTAGILIGG NGLQGTFISL RALDEGFSTS LIGVVGAGYN IGFAIGCIYV
TRILRAIGHI RTFSAMAAIA SAAAISMVLI IDPWFWFLMR LVAGICFASL FATVESWLNA
SVTNANRGRT LSVYRLVDLG SVTAAQYAIP GIGIGGFELF AIISMALTLS LVPISFADRS
SPVTPEAIRF DVKTLWNISP LATIGCIVVG LTNAAFRSLG PIYAQEIGLS VTAIATFMSA
GIIGGVVLQY PLGYYSDRID RRLIILLATF GSLLAGLFLA FGAGSDEWLN FAGIFAFGAF
AMPLFSLCSA QANDHAAEGQ HALVSAGMLF FWSLGAIIGP LFASFLLEIF APQVLFIYTA
AILGAFMLYT LLRMTARKPV PTEERSMRFR NLLRTSSFFN KLAGGHARKE P
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