Gene Smed_0795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0795 
Symbol 
ID5321632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp852737 
End bp854947 
Gene Length2211 bp 
Protein Length736 aa 
Translation table11 
GC content60% 
IMG OID640789732 
Productpolyphosphate kinase 
Protein accessionYP_001326486 
Protein GI150396019 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0855] Polyphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.411084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.829527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACG CGACGTCTGC AATCACGGAA AGCGAGCCGC CGGCCGAGCC GAAGCGTGAG 
GCGCCTGTCG AGCAACCGGA CCTTCTCACG AGCCCCGAGC GCTTCGTCAA CCGGGAATTC
TCCTGGCTTC AGTTCAATCG CCGGGTCCTC GAAGAGACGT TGAACACCGC GCATCCGCTC
CTGGAACGCG TCCGCTTCCT GTCGATCTCC GCCGCCAATC TCGATGAGTT TTTCATGGTC
CGTGTCGCGG GCCTTGAAGG CCAGGTGCGA TCTGGGCTTT CGCTGCGAAG CCCGGACGGA
AGGACGCCGG CGGAAACGCT GGAAAGCATT CTGACGGAAG TCGACAATCT GCAGATGGAG
CAGCAGGCCT CGCTTGCCGT CCTGCAGCAA TATCTCGCCA AGGAAGACAT CCTCATCGTC
CGTCCGGCTT CGCTTTCCTC ACAGGATCGC AACTGGCTCG CGAACGAATT CGACCAGGCG
ATCTTTCCGG TTCTGACGCC GCTTTCAATC GATCCGGCAC ACCCGTTCCC GTTCATTCCC
AATCTCGGCT TCTCTATCGG CCTTCAACTC GTCAGCAAGA CGGGGCGCGA CCCGATGACT
GCGCTCCTGC GTCTGCCGGT GGCGCTCGAT CGTTTCGTTC GCCTGCCGGA CGTCAAGAAC
GTCATCCGCT ACATCACCCT CGAAGATGTC GTCAGCCAGT TCATCGACCG GCTCTTCCCA
GGATACGAGG TGAAGGGTTC GGGCACGTTC CGCATCATCA GGGACAGCGA TATCGAAGTC
GAGGAAGAAG CCGAAGACCT CGTGCGTCTT TTCGAGACGG CGCTCAAGCG TCGCCGTCGC
GGTTCGGTTA TCCGCATCGA GACCGATTCC GAAATGCCGG CTTCCTTGCG CCAGTTCGTC
GTGCAGGAAC TCGGTGTTCC GGATAACCGC GTCGCGGTGC TGCCCGGCCT GCTTGCGCTC
AACACGCTTT CGGAGATCAC CAAGGCGCCG CGCGAGGATC TGCGCTTCGA GGCTTACAAC
CCGCGCTTCC CCGAACGGGT GCGCGAACAT GCGGGCGACT GTCTTGCCGC CATCCGCGAA
AAGGACATGG TGGTTCACCA CCCCTACGAA TCCTTCGATG TCGTCGTTCA GTTTCTGTTG
CAGGCGGCGC GCGATCCGGA CGTGCTTGCG ATCAAGCAGA CGCTTTACCG AACCTCGAAC
GACAGCCCGA TCGTGCGCGC GCTGATCGAC GCCGCCGATG CCGGCAAGTC GGTGACCGCG
CTTGTCGAGC TCAAGGCGCG GTTCGACGAG GAGGCAAATA TCCGCTGGGC GCGAGACCTC
GAACGCGCCG GCGTCCAGGT CGTTTTCGGC TTCATCGAAT TGAAGACCCA CGCCAAGATG
TCGATGGTCG TGCGCCGCGA GGAAGGCAAG CTCAGGACCT ACTGCCATCT CGGTACCGGC
AATTACCATC CCGTCACGGC GAAAATCTAC ACCGATCTGT CGTTCTTCAC CTGCAACCCG
GTGATTGCCC ACGACATGGC GAACATCTTC AACTTCATCA CCGGCTATGG CGAGCCGGAG
GGAGGCATGA AGCTTGCCGT CTCCCCGCAT ACGCTGCGTC CGCGCATCCT CAAGCACATC
GAAGAGGAGA TCGGCCATGC TCAATCCGGT CGTCCGGCGT CGATCTGGAT GAAGATGAAC
TCCCTCGTGG ATCCGGAGAT TATCGATGCG CTCTACAAGG CAAGCGGTGC AGGCGTCGAG
ATCGATCTCG TCGTGCGCGG CATCTGCTGC CTCAGACCGC AGGTGCCGGG GCTCTCCGAC
AACATCCGCG TCAAATCCAT CGTCGGCCGC TTCCTCGAAC ATTCGAGAAT TTTCTGTTTC
GGCAACGGAC ATGGGCTTCC ATCGGAGAAT GCGCTTGTCT ATATCGGCTC GGCGGATATG
ATGCCGCGCA ATCTGGATAG GCGGGTGGAG ACGCTCGTTC CCCTTATCAA CCGCACTGTG
CACGAACAGG TTCTTTCGCA GATCATGCTG GGCAATCTCA TCGACAACCA GCAGAGCTAC
GAAATTCTTC CGGACGGCAC CTCTCGTCGG ATGGAAGTCG GCAAGGACGC CGAGCCGTTC
AACGCGCAGC ATTATTTCAT GACCAATCCG AGCCTTTCGG GTCGGGGTGA GGCTTTGAAA
TCCAGTGCAC CGAAGCTGAT CGCCGGCTGG AAGGGCGGCT GGCGCGAGTA A
 
Protein sequence
MDNATSAITE SEPPAEPKRE APVEQPDLLT SPERFVNREF SWLQFNRRVL EETLNTAHPL 
LERVRFLSIS AANLDEFFMV RVAGLEGQVR SGLSLRSPDG RTPAETLESI LTEVDNLQME
QQASLAVLQQ YLAKEDILIV RPASLSSQDR NWLANEFDQA IFPVLTPLSI DPAHPFPFIP
NLGFSIGLQL VSKTGRDPMT ALLRLPVALD RFVRLPDVKN VIRYITLEDV VSQFIDRLFP
GYEVKGSGTF RIIRDSDIEV EEEAEDLVRL FETALKRRRR GSVIRIETDS EMPASLRQFV
VQELGVPDNR VAVLPGLLAL NTLSEITKAP REDLRFEAYN PRFPERVREH AGDCLAAIRE
KDMVVHHPYE SFDVVVQFLL QAARDPDVLA IKQTLYRTSN DSPIVRALID AADAGKSVTA
LVELKARFDE EANIRWARDL ERAGVQVVFG FIELKTHAKM SMVVRREEGK LRTYCHLGTG
NYHPVTAKIY TDLSFFTCNP VIAHDMANIF NFITGYGEPE GGMKLAVSPH TLRPRILKHI
EEEIGHAQSG RPASIWMKMN SLVDPEIIDA LYKASGAGVE IDLVVRGICC LRPQVPGLSD
NIRVKSIVGR FLEHSRIFCF GNGHGLPSEN ALVYIGSADM MPRNLDRRVE TLVPLINRTV
HEQVLSQIML GNLIDNQQSY EILPDGTSRR MEVGKDAEPF NAQHYFMTNP SLSGRGEALK
SSAPKLIAGW KGGWRE