Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0794 |
Symbol | |
ID | 5321631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 851983 |
End bp | 852672 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640789731 |
Product | hypothetical protein |
Protein accession | YP_001326485 |
Protein GI | 150396018 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.482692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.823382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGAC CTCTGTCGGA ACAATTGCCT TTAGCCTTTG GCCATGCGCC CGCTACCGGT CGCGACGACC TGCTCGTGTC CGATCGGCTG AGCGCGGCCA TTTCCATCGT CGATCACTGG CCCGCATGGC CGTCGCCCGT GGTGATCATC TGCGGTCCGG TGGGTTCCGG CAAATCGCAC CTGGCCGGCA TCTGGCGCGA AAAGGCCGGG GCGGAGCCGA TACATCCCGT TGCCGGTTCG GACGCCGCGG ATATCGCCGC AGAGAAACCG GTACTTTTCG AGGATGCCGA CCGGCAAGGT TTCGATGAGG CCGCTCTCTT CCATGTCATC AACAGCGTGC GCCAGAACGG CACGGCGCTG TTGATGACGT CGCGGCTGTG GCCGATGTCA TGGCCGGTGG AGTTGCCTGA CCTGAAGTCG CGCCTGAAGG CTGCCACCGT CGTCGAAATC GGCGAGCCGG ACGACGAGCT GCTGATGCAG GTGCTCACCA AACTCTTTGC CGACCGCCAG CTTTTCGTCG ACGAGCGCCT GATCGGCTAC ATCGTGGCGC GCATGGAGCG CTCGCTGGAG GCGGCGCAGA CCATTGTCGA ACGGATCGAT CATCTGGCGC TTGCGCGCGC AACGCGGCCG ACCCGTGCTC TGGCCGCGGA AGTGCTGGAG GCGCTTGCGG ATACGAGCCT CCCCGATTGA
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Protein sequence | MKRPLSEQLP LAFGHAPATG RDDLLVSDRL SAAISIVDHW PAWPSPVVII CGPVGSGKSH LAGIWREKAG AEPIHPVAGS DAADIAAEKP VLFEDADRQG FDEAALFHVI NSVRQNGTAL LMTSRLWPMS WPVELPDLKS RLKAATVVEI GEPDDELLMQ VLTKLFADRQ LFVDERLIGY IVARMERSLE AAQTIVERID HLALARATRP TRALAAEVLE ALADTSLPD
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