Gene Smed_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0794 
Symbol 
ID5321631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp851983 
End bp852672 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content64% 
IMG OID640789731 
Producthypothetical protein 
Protein accessionYP_001326485 
Protein GI150396018 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.482692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.823382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAC CTCTGTCGGA ACAATTGCCT TTAGCCTTTG GCCATGCGCC CGCTACCGGT 
CGCGACGACC TGCTCGTGTC CGATCGGCTG AGCGCGGCCA TTTCCATCGT CGATCACTGG
CCCGCATGGC CGTCGCCCGT GGTGATCATC TGCGGTCCGG TGGGTTCCGG CAAATCGCAC
CTGGCCGGCA TCTGGCGCGA AAAGGCCGGG GCGGAGCCGA TACATCCCGT TGCCGGTTCG
GACGCCGCGG ATATCGCCGC AGAGAAACCG GTACTTTTCG AGGATGCCGA CCGGCAAGGT
TTCGATGAGG CCGCTCTCTT CCATGTCATC AACAGCGTGC GCCAGAACGG CACGGCGCTG
TTGATGACGT CGCGGCTGTG GCCGATGTCA TGGCCGGTGG AGTTGCCTGA CCTGAAGTCG
CGCCTGAAGG CTGCCACCGT CGTCGAAATC GGCGAGCCGG ACGACGAGCT GCTGATGCAG
GTGCTCACCA AACTCTTTGC CGACCGCCAG CTTTTCGTCG ACGAGCGCCT GATCGGCTAC
ATCGTGGCGC GCATGGAGCG CTCGCTGGAG GCGGCGCAGA CCATTGTCGA ACGGATCGAT
CATCTGGCGC TTGCGCGCGC AACGCGGCCG ACCCGTGCTC TGGCCGCGGA AGTGCTGGAG
GCGCTTGCGG ATACGAGCCT CCCCGATTGA
 
Protein sequence
MKRPLSEQLP LAFGHAPATG RDDLLVSDRL SAAISIVDHW PAWPSPVVII CGPVGSGKSH 
LAGIWREKAG AEPIHPVAGS DAADIAAEKP VLFEDADRQG FDEAALFHVI NSVRQNGTAL
LMTSRLWPMS WPVELPDLKS RLKAATVVEI GEPDDELLMQ VLTKLFADRQ LFVDERLIGY
IVARMERSLE AAQTIVERID HLALARATRP TRALAAEVLE ALADTSLPD