Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0793 |
Symbol | |
ID | 5321630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 850609 |
End bp | 851748 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640789730 |
Product | hypothetical protein |
Protein accession | YP_001326484 |
Protein GI | 150396017 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.114477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.678459 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGCG CAACGGGGGC GGTCATGGGC GATCGGGTCA GCAGCAGGGG ACTTCAGCGC CAGCTCTTTT TCTGGCTGCT GGTGCTTGTC GGCTTCATTG CGTTTTTGCT GGTTTTCAGT TCCATTCTCC TGCCGTTCCT GGCCGGTATG GCGCTCGCTT ATTTCCTCGA CCCGGTCGCC GATCGCCTTG AACGGCTGGG CCTGAACCGG CTGATGGCAA CGATCGCGAT CCTCGTCGCC TTCGTCGTCG TGCTGGCGCT ATCGCTGATG ATCATCGTTC CGTTGGTCTT CACGCAGGCC GCCGAATTCA TCGAGAAGAT GCCGGGATAT ATCACCAAGC TTCAGGCGTT CCTGACCGAC AGCCAGACCA CGCTTTTGCC GGATTGGCTC GCTGGCCAGA TGGCGACCAT CAAGCAAAAC TCGGCCAAGC TTCTGGAGCA GGGCGCAAGT TTCCTCGGCT CGCTGTTCCA GCAGATATGG AACTCCGGGA TGGCGCTGCT CAATATCCTT TCCCTTTTCG TCATCACTCC CGTCGTCGCT TTCTACCTGT TGCTCGACTG GGATCGTATG GTCGATAGGG TCGATAGCTG GATACCACGC GATTACGTCG AGGTGGTGCG GCAGATCGCC CGCGACATGA ATGCGAGCAT TGCCGGATTC GTTCGTGGGC AGGGCTCGCT CTGCGTGATC CTCGGCCTTT ATTATGCAAT TGGGCTGACA TTGGTCGGCC TCAATTTCGG TCTCCTGATC GGCCTTTTCG CCGGTATGAT CAGTTTCATT CCCTATGTGG GATCGCTGGT CGGCCTCGTG CTCGCACTCG GCGTCGCGCT CGTTCAGTTC TGGCCCGATT ACATCTGGAT TCTCCTGGTT CTCGCCGTCT TCTTCAGCGG CCAGTTTCTC GAAGGCAATA TTCTTCAGCC GAAGCTGGTC GGCAGAAGCG TCGGCCTTCA CCCGGTCTGG CTGATGTTCG CCCTTCTTGC ATTCGGTGCG CTTTTCGGCT TTGTCGGTCT TCTCGTGGCG GTTCCTGCGG CGGCGGCCAT CGGCGTGCTT GTCCGCTTCG GCATCCAGCG GTACCTTGCT AGCGACCTCT ATCACGGGCA TAGAGCAGCC GTTCGCAAGG AGCCGGAGAG CCACGGCTAG
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Protein sequence | MPRATGAVMG DRVSSRGLQR QLFFWLLVLV GFIAFLLVFS SILLPFLAGM ALAYFLDPVA DRLERLGLNR LMATIAILVA FVVVLALSLM IIVPLVFTQA AEFIEKMPGY ITKLQAFLTD SQTTLLPDWL AGQMATIKQN SAKLLEQGAS FLGSLFQQIW NSGMALLNIL SLFVITPVVA FYLLLDWDRM VDRVDSWIPR DYVEVVRQIA RDMNASIAGF VRGQGSLCVI LGLYYAIGLT LVGLNFGLLI GLFAGMISFI PYVGSLVGLV LALGVALVQF WPDYIWILLV LAVFFSGQFL EGNILQPKLV GRSVGLHPVW LMFALLAFGA LFGFVGLLVA VPAAAAIGVL VRFGIQRYLA SDLYHGHRAA VRKEPESHG
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