Gene Smed_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0793 
Symbol 
ID5321630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp850609 
End bp851748 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content59% 
IMG OID640789730 
Producthypothetical protein 
Protein accessionYP_001326484 
Protein GI150396017 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.114477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.678459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCG CAACGGGGGC GGTCATGGGC GATCGGGTCA GCAGCAGGGG ACTTCAGCGC 
CAGCTCTTTT TCTGGCTGCT GGTGCTTGTC GGCTTCATTG CGTTTTTGCT GGTTTTCAGT
TCCATTCTCC TGCCGTTCCT GGCCGGTATG GCGCTCGCTT ATTTCCTCGA CCCGGTCGCC
GATCGCCTTG AACGGCTGGG CCTGAACCGG CTGATGGCAA CGATCGCGAT CCTCGTCGCC
TTCGTCGTCG TGCTGGCGCT ATCGCTGATG ATCATCGTTC CGTTGGTCTT CACGCAGGCC
GCCGAATTCA TCGAGAAGAT GCCGGGATAT ATCACCAAGC TTCAGGCGTT CCTGACCGAC
AGCCAGACCA CGCTTTTGCC GGATTGGCTC GCTGGCCAGA TGGCGACCAT CAAGCAAAAC
TCGGCCAAGC TTCTGGAGCA GGGCGCAAGT TTCCTCGGCT CGCTGTTCCA GCAGATATGG
AACTCCGGGA TGGCGCTGCT CAATATCCTT TCCCTTTTCG TCATCACTCC CGTCGTCGCT
TTCTACCTGT TGCTCGACTG GGATCGTATG GTCGATAGGG TCGATAGCTG GATACCACGC
GATTACGTCG AGGTGGTGCG GCAGATCGCC CGCGACATGA ATGCGAGCAT TGCCGGATTC
GTTCGTGGGC AGGGCTCGCT CTGCGTGATC CTCGGCCTTT ATTATGCAAT TGGGCTGACA
TTGGTCGGCC TCAATTTCGG TCTCCTGATC GGCCTTTTCG CCGGTATGAT CAGTTTCATT
CCCTATGTGG GATCGCTGGT CGGCCTCGTG CTCGCACTCG GCGTCGCGCT CGTTCAGTTC
TGGCCCGATT ACATCTGGAT TCTCCTGGTT CTCGCCGTCT TCTTCAGCGG CCAGTTTCTC
GAAGGCAATA TTCTTCAGCC GAAGCTGGTC GGCAGAAGCG TCGGCCTTCA CCCGGTCTGG
CTGATGTTCG CCCTTCTTGC ATTCGGTGCG CTTTTCGGCT TTGTCGGTCT TCTCGTGGCG
GTTCCTGCGG CGGCGGCCAT CGGCGTGCTT GTCCGCTTCG GCATCCAGCG GTACCTTGCT
AGCGACCTCT ATCACGGGCA TAGAGCAGCC GTTCGCAAGG AGCCGGAGAG CCACGGCTAG
 
Protein sequence
MPRATGAVMG DRVSSRGLQR QLFFWLLVLV GFIAFLLVFS SILLPFLAGM ALAYFLDPVA 
DRLERLGLNR LMATIAILVA FVVVLALSLM IIVPLVFTQA AEFIEKMPGY ITKLQAFLTD
SQTTLLPDWL AGQMATIKQN SAKLLEQGAS FLGSLFQQIW NSGMALLNIL SLFVITPVVA
FYLLLDWDRM VDRVDSWIPR DYVEVVRQIA RDMNASIAGF VRGQGSLCVI LGLYYAIGLT
LVGLNFGLLI GLFAGMISFI PYVGSLVGLV LALGVALVQF WPDYIWILLV LAVFFSGQFL
EGNILQPKLV GRSVGLHPVW LMFALLAFGA LFGFVGLLVA VPAAAAIGVL VRFGIQRYLA
SDLYHGHRAA VRKEPESHG