| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0788 |
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| Symbol | |
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| ID | 5321625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 844870 |
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| End bp | 845739 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789725 |
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| Product | hypothetical protein |
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| Protein accession | YP_001326479 |
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| Protein GI | 150396012 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2961] Protein involved in catabolism of external DNA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0241921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.12768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTACC GGCACATCTA TCACGCGGGC AACTTTGCCG ATGTCCTGAA GCACGCCGTT
GTGGCGCGAC TCGTCACCTA TCTGGAGCAG AAGGACAAAG CCTTCCGCGT GCTCGACACC
CATGCCGGGA TCGGACTCTA TGATCTTTCT AGTGAAGAGG CGCAGAAGAC CGGAGAATGG
CGGGAGGGTA TCGGCCGGCT GATCGAAGCC GAGCTTCCAG CGCCAGTCGC CGCAATGCTC
AAGCCATATC TTTCCGCCGT TCGCGAGCTC AACCCCAAGG GCGGGCTTGC GTTTTATCCC
GGTTCGCCGA AGCTTGTCCG CATGCTGTTT CGCCCACAGG ATCGTCTGTC GGCCATGGAA
TTGCATCCGG AGGACTACGA GGCGCTGCAC CGACTCTTCG AGGGTGACTT CCAGAGCCGA
ATCACCCTGC TCGACGGCTG GCTGGCGCTG GGCGCCCATC TGCCGCCCAA GGAGAAGCGC
GGGCTCGTTC TCGTCGATCC TCCTTTTGAG GCCGAAGGTG AGTATGACCG GCTGGTGGAC
GGGCTCGCCA AGGCATATCG CCGCTTTTCC GGCGGCATCT TCTGCCTCTG GTATCCCCTC
AAAAAGGCTG CGCCGGTCAA GGCGTTTCAC GAATCTCTGA AGGCACTTGA AATCCCGAAG
ATGCTCTGCG CGGAATTATC GGTGCGCAGC GATCGCGAGA CGACGGGGCT TTCCGGATCC
GGTCTCGTGA TCGTCAATCC GCCCTTTACG TTGAAAGGCG AACTGGACAT CCTCCTGCCC
TACCTGAAGT CGCAACTCGC CCAGGACCGT TTCGCATCCG GACGCTGCTT CTGGTTGCGC
GGCGAGGAGC CGCTCAAACG GGGGCCTTGA
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| Protein sequence | MNYRHIYHAG NFADVLKHAV VARLVTYLEQ KDKAFRVLDT HAGIGLYDLS SEEAQKTGEW
REGIGRLIEA ELPAPVAAML KPYLSAVREL NPKGGLAFYP GSPKLVRMLF RPQDRLSAME
LHPEDYEALH RLFEGDFQSR ITLLDGWLAL GAHLPPKEKR GLVLVDPPFE AEGEYDRLVD
GLAKAYRRFS GGIFCLWYPL KKAAPVKAFH ESLKALEIPK MLCAELSVRS DRETTGLSGS
GLVIVNPPFT LKGELDILLP YLKSQLAQDR FASGRCFWLR GEEPLKRGP
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