Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0786 |
Symbol | |
ID | 5321623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 843563 |
End bp | 844321 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789723 |
Product | ribonuclease T2 |
Protein accession | YP_001326477 |
Protein GI | 150396010 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG3719] Ribonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.123523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0777088 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAGT ACAGAGACCT GACGCGCGGC GTACGATCCC GATCGAACGC GATGCGCTTC GGCCTGTTGC CGGCGATCGT TGCCCTTGCC ACCATTTGCG GCTGTAGCAA TGAAGAAGGC AGCCAGGCAC CGCCGAAGGC GCCAAACGAT GCCGGCAGCA TTGCGGCAAC CGCGAATATG CCCGTCGGCA AGGGTTTCGA CTTCTATGTC CTTTCCCTTT CCTGGTCGCC GACTTGGTGC GGCGCCAACG ACCCAAAAGG CAAGTCCGGC CAATGCGAAG ACGGCAGCGG ACATGGTCTG ATCGTGCATG GTCTCTGGCC TCAGGAGGAA AGCGGATATC CGGAATATTG CCGGACCCGG CAGTCCGACC GCGTGCCGGA ATCGCTCGGC CGGCAATATT TCGATCTCAT TCCCTCGATG GGCCTGATCG GCCACCAGTG GCGCAAACAC GGTACCTGCT CCGGCCTCAG CCAGAGCGAT TATTTCGCTG TCACCCGGGC CGCCCGTGAG AGACTCGTCA TTCCTCCGGA GTTGATGGGT GCGGCCGGCT CGACGACCCT CTCCGTTCCG GCGATCGAAG CCGCCTTCAG GGAAAGCAAT TCCGGGATGA CGAGCGACGC GATCGCTGTT ACCTGCGAAG GCAGGCTGCT CGAAGAAATT AGGGTCTGCT TCGATAAGGA GCTGAAATTC AGGCCCTGCC CTCAAGTAGA CCGACAGGCC TGCAGACGAG ACTCGGTCTT GCTGCCTCCA GCACCATGA
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Protein sequence | MREYRDLTRG VRSRSNAMRF GLLPAIVALA TICGCSNEEG SQAPPKAPND AGSIAATANM PVGKGFDFYV LSLSWSPTWC GANDPKGKSG QCEDGSGHGL IVHGLWPQEE SGYPEYCRTR QSDRVPESLG RQYFDLIPSM GLIGHQWRKH GTCSGLSQSD YFAVTRAARE RLVIPPELMG AAGSTTLSVP AIEAAFRESN SGMTSDAIAV TCEGRLLEEI RVCFDKELKF RPCPQVDRQA CRRDSVLLPP AP
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