Gene Smed_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0786 
Symbol 
ID5321623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp843563 
End bp844321 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content61% 
IMG OID640789723 
Productribonuclease T2 
Protein accessionYP_001326477 
Protein GI150396010 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3719] Ribonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.123523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0777088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAGT ACAGAGACCT GACGCGCGGC GTACGATCCC GATCGAACGC GATGCGCTTC 
GGCCTGTTGC CGGCGATCGT TGCCCTTGCC ACCATTTGCG GCTGTAGCAA TGAAGAAGGC
AGCCAGGCAC CGCCGAAGGC GCCAAACGAT GCCGGCAGCA TTGCGGCAAC CGCGAATATG
CCCGTCGGCA AGGGTTTCGA CTTCTATGTC CTTTCCCTTT CCTGGTCGCC GACTTGGTGC
GGCGCCAACG ACCCAAAAGG CAAGTCCGGC CAATGCGAAG ACGGCAGCGG ACATGGTCTG
ATCGTGCATG GTCTCTGGCC TCAGGAGGAA AGCGGATATC CGGAATATTG CCGGACCCGG
CAGTCCGACC GCGTGCCGGA ATCGCTCGGC CGGCAATATT TCGATCTCAT TCCCTCGATG
GGCCTGATCG GCCACCAGTG GCGCAAACAC GGTACCTGCT CCGGCCTCAG CCAGAGCGAT
TATTTCGCTG TCACCCGGGC CGCCCGTGAG AGACTCGTCA TTCCTCCGGA GTTGATGGGT
GCGGCCGGCT CGACGACCCT CTCCGTTCCG GCGATCGAAG CCGCCTTCAG GGAAAGCAAT
TCCGGGATGA CGAGCGACGC GATCGCTGTT ACCTGCGAAG GCAGGCTGCT CGAAGAAATT
AGGGTCTGCT TCGATAAGGA GCTGAAATTC AGGCCCTGCC CTCAAGTAGA CCGACAGGCC
TGCAGACGAG ACTCGGTCTT GCTGCCTCCA GCACCATGA
 
Protein sequence
MREYRDLTRG VRSRSNAMRF GLLPAIVALA TICGCSNEEG SQAPPKAPND AGSIAATANM 
PVGKGFDFYV LSLSWSPTWC GANDPKGKSG QCEDGSGHGL IVHGLWPQEE SGYPEYCRTR
QSDRVPESLG RQYFDLIPSM GLIGHQWRKH GTCSGLSQSD YFAVTRAARE RLVIPPELMG
AAGSTTLSVP AIEAAFRESN SGMTSDAIAV TCEGRLLEEI RVCFDKELKF RPCPQVDRQA
CRRDSVLLPP AP