| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0783 |
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| Symbol | |
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| ID | 5321620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 841104 |
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| End bp | 841868 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789720 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001326474 |
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| Protein GI | 150396007 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.36858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0521945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAAGGA CACTCAAGGC GGCGCTCGTT ACCGGCGGTG CGCGACGCAT CGGCAGGGCA
ATAGTCGAGG ATCTGGCGAC GCATGGTTTC GCGGTCGCCA TTCACGCCAA CGGGTCTTTC
GCCGAGGCGG AGGCGCTTGC GGCGAGTCTT AGAGGGAGCG GCGCCAAGGC CATCGCTCTC
AGGGCTGATC TTACCGAAAT CGGTGCCGTC TCCAGGCTCG TTGCCGAGGC AACCGGCTCG
ATCGGTCCGC TGGATCTTCT GGTCAATAAT GCCTCGGTGT TCAACAAGGA CAGCATCGCC
GAGTTCGACG AAGCGGTGTG GGAACGGCAC TTCGCCCTTC ATGTCAAAGC CCCCTCCCTG
CTTGCGCGCG ATTTTGCCCA GCAACGGCAG GCCGACGTCT CCGGTCTCAT CGTCAATGTC
ATCGATCAGC GCGTATGGTC TCCAAATCCG CGCTTTTATT CCTATATGCT GTCCAAGTCG
GCGCTGTGGA CGGCAACCCA GACCATGGCC CAGGCGCTCG CACCCGAAAT TCGCGTCAAT
GGCATCGGGC CTGGCCCGAC GCTGCCGAAC GATCGGCAGG ACCCTCGCGA TTTCCAGGCG
CAGGTCGAGG CGCTGATCCT CAGGCGCGGT CCGGCGCTCG ATGAGTTCGG ACGTGCGATC
CGCTTCCTTT TCGACACGCC GTCGATCACC GGACAGATGA TCGCGCTGGA CGGGGGCCAG
CACCTCGCAT GGGAGACGCC TGATATCAGG GAGATAGTGG AATGA
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| Protein sequence | MKRTLKAALV TGGARRIGRA IVEDLATHGF AVAIHANGSF AEAEALAASL RGSGAKAIAL
RADLTEIGAV SRLVAEATGS IGPLDLLVNN ASVFNKDSIA EFDEAVWERH FALHVKAPSL
LARDFAQQRQ ADVSGLIVNV IDQRVWSPNP RFYSYMLSKS ALWTATQTMA QALAPEIRVN
GIGPGPTLPN DRQDPRDFQA QVEALILRRG PALDEFGRAI RFLFDTPSIT GQMIALDGGQ
HLAWETPDIR EIVE
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