Gene Smed_0758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0758 
Symbol 
ID5321595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp814327 
End bp815214 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content63% 
IMG OID640789695 
Producthypothetical protein 
Protein accessionYP_001326449 
Protein GI150395982 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.185602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCC AATCGATGAC CGGCTTTGCC AGGAGTGAGG GGAGCAGCGG GCGCTATCGC 
TGGGCCTGGG AACTCCGCTC CGTCAATGGC AAAGGGCTCG ACATGCGCCT GCGGCTGCCG
CCCGGGCTGG AGCGCTTCGA GCCCGACTGT CGACGCCTTG CTTCGCAGCA TTTCGCACGA
GGCAACGTGC AGGTCGGCCT TTCGCTCAGC AGAACTGAAA CCTCGGTCGA AGCCGTCGTC
AACGAGGACG CGCTTGCCGC CGTCCTGAAG CTTCGCGAAC GGCTGGGCGA TGCAATCGAT
CCGGCGCCGC TCAAACTCGA CACGCTGCTT TCCATACGCG GCATCGTCGA TTTCCGGGAA
CCGGAGGAGA GCGAAAGCGA GCGCGCCGAG CGTGACGCGG AGGTACTCGC GGGCCTCGAA
GGCGCGCTCG CAGATCTGCG GGCGATGCGG GAAGAAGAGG GCAAAGCGCT CGGCCAGGTT
TTGCTCGCCC AGGTGGATCG GATGGAAAAG CTGGCGGCAA TCGTCGAAAA CGATCCGTCC
CGAAGCCCGA AGGCGATCGC CGACAGGTTG GCGCAGCAGG TCTCGATGGT CATCGACAAT
GCATCCTCGA TCGATCGGGA AAGGTTGCAT GCGGAGGTAG CGCTGCTGGC GACGAAGGCG
GACCTTCGCG AGGAACTCGA CCGGCTGAGC TCGCATATCG CTGCCGCTCG CGACCTCCTG
ACAAAGGGTG GGCCCGTCGG GCGCAAGCTC GATTTCCTTG CACAGGAATT TAACCGCGAA
TCGAATACCA TCTGTTCGAA GTCGAATGCC GCCGCCGTCT CGGCCGCCGG TATCGAGTTG
AAGGTCGTAA TCGACCATTT CCGCGAACAG GTTCAGAATC TGGAGTAG
 
Protein sequence
MPLQSMTGFA RSEGSSGRYR WAWELRSVNG KGLDMRLRLP PGLERFEPDC RRLASQHFAR 
GNVQVGLSLS RTETSVEAVV NEDALAAVLK LRERLGDAID PAPLKLDTLL SIRGIVDFRE
PEESESERAE RDAEVLAGLE GALADLRAMR EEEGKALGQV LLAQVDRMEK LAAIVENDPS
RSPKAIADRL AQQVSMVIDN ASSIDRERLH AEVALLATKA DLREELDRLS SHIAAARDLL
TKGGPVGRKL DFLAQEFNRE SNTICSKSNA AAVSAAGIEL KVVIDHFREQ VQNLE