Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0758 |
Symbol | |
ID | 5321595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 814327 |
End bp | 815214 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640789695 |
Product | hypothetical protein |
Protein accession | YP_001326449 |
Protein GI | 150395982 |
COG category | [S] Function unknown |
COG ID | [COG1561] Uncharacterized stress-induced protein |
TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.185602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCTCC AATCGATGAC CGGCTTTGCC AGGAGTGAGG GGAGCAGCGG GCGCTATCGC TGGGCCTGGG AACTCCGCTC CGTCAATGGC AAAGGGCTCG ACATGCGCCT GCGGCTGCCG CCCGGGCTGG AGCGCTTCGA GCCCGACTGT CGACGCCTTG CTTCGCAGCA TTTCGCACGA GGCAACGTGC AGGTCGGCCT TTCGCTCAGC AGAACTGAAA CCTCGGTCGA AGCCGTCGTC AACGAGGACG CGCTTGCCGC CGTCCTGAAG CTTCGCGAAC GGCTGGGCGA TGCAATCGAT CCGGCGCCGC TCAAACTCGA CACGCTGCTT TCCATACGCG GCATCGTCGA TTTCCGGGAA CCGGAGGAGA GCGAAAGCGA GCGCGCCGAG CGTGACGCGG AGGTACTCGC GGGCCTCGAA GGCGCGCTCG CAGATCTGCG GGCGATGCGG GAAGAAGAGG GCAAAGCGCT CGGCCAGGTT TTGCTCGCCC AGGTGGATCG GATGGAAAAG CTGGCGGCAA TCGTCGAAAA CGATCCGTCC CGAAGCCCGA AGGCGATCGC CGACAGGTTG GCGCAGCAGG TCTCGATGGT CATCGACAAT GCATCCTCGA TCGATCGGGA AAGGTTGCAT GCGGAGGTAG CGCTGCTGGC GACGAAGGCG GACCTTCGCG AGGAACTCGA CCGGCTGAGC TCGCATATCG CTGCCGCTCG CGACCTCCTG ACAAAGGGTG GGCCCGTCGG GCGCAAGCTC GATTTCCTTG CACAGGAATT TAACCGCGAA TCGAATACCA TCTGTTCGAA GTCGAATGCC GCCGCCGTCT CGGCCGCCGG TATCGAGTTG AAGGTCGTAA TCGACCATTT CCGCGAACAG GTTCAGAATC TGGAGTAG
|
Protein sequence | MPLQSMTGFA RSEGSSGRYR WAWELRSVNG KGLDMRLRLP PGLERFEPDC RRLASQHFAR GNVQVGLSLS RTETSVEAVV NEDALAAVLK LRERLGDAID PAPLKLDTLL SIRGIVDFRE PEESESERAE RDAEVLAGLE GALADLRAMR EEEGKALGQV LLAQVDRMEK LAAIVENDPS RSPKAIADRL AQQVSMVIDN ASSIDRERLH AEVALLATKA DLREELDRLS SHIAAARDLL TKGGPVGRKL DFLAQEFNRE SNTICSKSNA AAVSAAGIEL KVVIDHFREQ VQNLE
|
| |