| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0745 |
|---|
| Symbol | |
|---|
| ID | 5321582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 798789 |
|---|
| End bp | 799526 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640789682 |
|---|
| Product | 3-ketoacyl-(acyl-carrier-protein) reductase NodG |
|---|
| Protein accession | YP_001326436 |
|---|
| Protein GI | 150395969 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.451524 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.538946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATC TTTCAGGCCG CAAGGCTCTC GTAACCGGCG CTTCGGGTGG CATTGGCGAA
GAAATCGCCC GCCTGCTGCA TGCTCAGGGC GCCGTTGTGG GGCTGCATGG CACCCGCGTC
GAAAAGCTCG AAGCCCTTGC CGATACCCTC GGCGAACGGG TTCATATCTT TCCGGCAAAT
CTCTCCGACC GTGCAGAAGT CAAGGCGCTC GGTGAAAAGG CGGAGGCCGA TCTCGGCGGC
GTCGATATCC TCGTCAACAA TGCCGGCATT ACCAAGGACG GGCTCTTCGT CCGTATGAGC
GACGAAGACT GGGACAACGT CATCGAAGTC AATCTCACGG CCGTCTTTCG CCTGACACGC
GAACTTACGC ATCCGATGAT GCGGCGACGC TTCGGCCGCA TCGTCAACAT AACGTCCATC
GTCGGCGTGA CGGGCAACCC GGGGCAGGCA AATTATTGCG CCTCAAAGGC CGGCATGATC
GGCTTCTCCA AGTCGCTCGC CCAGGAAATC GCAACCCGAA ACGTCACGGT CAATTGCGTC
GCACCGGGTT TCATCGAAAG CGCGATGACC GGGAAGCTGA ACGACAAGCA AAAGGAAGGG
ATCATGTCTG CGATCCCGAT GCGGCGGATG GGAAACGGAG CGGAAGTTGC TTCGGCGGTC
GCCTATCTAG CCTCGAACGA AGCCGGATAC GTCACCGGCC AGACGATCCA CGTCAACGGC
GGTATGGCGA TGATCTGA
|
|---|
| Protein sequence | MFDLSGRKAL VTGASGGIGE EIARLLHAQG AVVGLHGTRV EKLEALADTL GERVHIFPAN
LSDRAEVKAL GEKAEADLGG VDILVNNAGI TKDGLFVRMS DEDWDNVIEV NLTAVFRLTR
ELTHPMMRRR FGRIVNITSI VGVTGNPGQA NYCASKAGMI GFSKSLAQEI ATRNVTVNCV
APGFIESAMT GKLNDKQKEG IMSAIPMRRM GNGAEVASAV AYLASNEAGY VTGQTIHVNG
GMAMI
|
|---|
| |