| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0737 |
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| Symbol | |
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| ID | 5321574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 792065 |
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| End bp | 793132 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640789674 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001326428 |
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| Protein GI | 150395961 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.855496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAAC ATTTTCGCTC CCCCAGCACG CTGGTCGTGC TTGTAGCCGG CCTTGCCGGT
CTTTCGCTCG TCCTTTACGC CTGGCGTCTG CCGCCCTTTG CCAGCTCCGT CGAAACCACG
GAGAACGCCT ATGTCCGCGG CTATGTGACG ACTATCAGCC CGCAGCTTGC CGGCTACGTC
GCCGAGGTGC CGGTGCGAGA CTACGAGGAG GTTAAGGCGG GCCAGCTCCT CGCCAGGATC
GACGACCGGA TCTTCGTCCA GAAGCTTGCG CAGGCGAAAG CCATGCTCGC GACACAGCGG
GCGGCCCTCG CGAACTCCTT CGAACAGGAG CTCTCGGCAA AGGCTGGAAT TACCGCGAGC
GAGGCCCAGC TCGACGGGGC TAAAGCAGCA TTGGCAACCG CGAGGGCCAC TTGGGATCGT
ATTCGTCCGC TCGCCGACAA GGGCGTTGCA ACACGGAGCG ACGCCGACCA GGCACGGGCC
GCCTTCCAGC AGGCGGAAGC GGGCGTCAAA CAGGCGATCG CCAATCTCGA AGTCTCGCGG
CAATCACTCG CCACCACACT CGGCGCGCGC GCCGGCCTTC AGGGTTCGGT TTCCGGTGCC
GAGGCGGCCG TTGAACTCGC CCAGATCGAC CTCGACAACA CCAGGATCGT TGCGCCGCGT
GCCGGTAGAC TTGGCGAGAT TGGCGCCCGT GTCGGACAAT ATGTCACTGC CGGCACGCAA
TTGGTTTCGG TCGTGCCGCA TGACGTCTGG ATCGTCGCCA ACTTCAAGGA GACGCAGCTT
GACGGGATGA GGGTCGGTCA GCCCGTCACC ATCTGGGTGG ACGCCCTGAA ACGCCAGGAG
TTGAAAGGTC ACATCGAGCG CTTCTCTCCA GCCGCGGGGT CGGAATTCAG CATAATACGT
CCCGACAACG CCACCGGCAA TTTCACGAAG GTGGCGCAAC GTCTCGGCGT GCGGATCGCC
GTCGATCCCG AACAGCCGTT GGCCGAGCGC CTTGCTCCCG GGCTTTCGGT CGTGGTCAAG
GTCGACAAGG CGGCCGAACC GCAGGCATCA ATCGCATCCG CAGGATAG
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| Protein sequence | MLKHFRSPST LVVLVAGLAG LSLVLYAWRL PPFASSVETT ENAYVRGYVT TISPQLAGYV
AEVPVRDYEE VKAGQLLARI DDRIFVQKLA QAKAMLATQR AALANSFEQE LSAKAGITAS
EAQLDGAKAA LATARATWDR IRPLADKGVA TRSDADQARA AFQQAEAGVK QAIANLEVSR
QSLATTLGAR AGLQGSVSGA EAAVELAQID LDNTRIVAPR AGRLGEIGAR VGQYVTAGTQ
LVSVVPHDVW IVANFKETQL DGMRVGQPVT IWVDALKRQE LKGHIERFSP AAGSEFSIIR
PDNATGNFTK VAQRLGVRIA VDPEQPLAER LAPGLSVVVK VDKAAEPQAS IASAG
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