Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0734 |
Symbol | |
ID | 5321571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 788168 |
End bp | 789667 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789671 |
Product | replicative DNA helicase |
Protein accession | YP_001326425 |
Protein GI | 150395958 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0305] Replicative DNA helicase |
TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00267216 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.96044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACG CAGCGCGAAA GCTCGCCCCT TTGGCCAAGG ATCAGGCGGA ACAGCATTAT CGCGAGGCGC CGAACAATCT GGAAGCGGAG CAGGCGCTGC TCGGCGCTAT TCTCGTCAAT AACGACGCCT ATTACCGCGT CTCGGACTTC CTGAAGCCCG TCCACCTCTA TGAGCCGCTG CATCGCAGGA TTTTCGAGAT CGCGGGCGAA ATCATCCGCA TGGGGAAGAC GGCCAACCCC GTAACCGTCA AGACCTTCCT CAAGGCCGAC GACAAGGTCG GCGACCTGAC GGTCGCGCAA TATCTCGCGC GTCTCGCCGC CGAAGCAGTG TCCATCATCA ATGCCGAGGA TTATGGCCGC GCGATCTACG ACCTGGCGCT CCGCCGGTCG CTGATCACCA TCGGCGAAGA CATGGTGAAT ATCGCCTATG ACGCGCCCCT CGACATGCCC CCGCAAAACC AGATCGAAGA CGCCGAACGA AGGTTGTTCG AACTGGCCGA GACCGGTCGC TACGACGGCG GCTTTCAGTC CTTCAACGAC GCGGTGGCGC TTGCCATCGA CATGGCCGGG CAGGCATTCG AGCGCGATGG TCATCTTTCC GGCATTTCCA CAGGTATCCA CTCGCTCGAC TCGAAGATGG GCGGCCTGCA GCGCTCGGAC CTGATCATTC TTGCCGGCCG TCCCGGCATG GGCAAGACCT CGCTTGCGAC CAATATCGCC TACAACATCG CTGCGTCCTA CGACCCTGAG GTTCAACCCG ATGGTTCCTT CAAGGCGAAG AACGGGGGGG TTGTCGGCTT CTATTCGCTC GAAATGTCCT CCGAGCAGCT AGCCACCCGT ATCATCTCGG AGCAGACCGA AGTCTCGTCG TCGAAGATCC GCCGCGGCGA GATTTCGGAA GCCGATTTCG AGAAGCTCGT AGCCTGCTCG CAGATGATGC AGAAGGTGCC TCTCTATATC GACCAGACCG GCGGCATCTC AATCGCCCAG CTTGCGGCGC GCGCACGCCG CCTGAAGCGG CAGCGCGGCC TGGACGTGCT CGTGGTCGAC TACATCCAGC TGATGACCGG TTCGAAGAAA TCGGGCGAAA ACCGTGTGCA GGAGATCACC GAAATCACCA CCGGCCTGAA GGCGCTCGGC AAGGAACTGA ACGTGCCGAT CATCGCGCTT TCGCAGCTCT CCCGTGCCGT CGAGAGCCGC GAGGACAAGC GCCCGCAGCT CTCCGACCTG CGTGAATCGG GCTCGATCGA ACAGGATGCA GACGTCGTGC TCTTCGTGTT CCGCGAGGAA TATTACGTGA AGAATGTGGA ACCGCGCGAC GAGTTCGATC CGAAATATGA AGAGTGGAAG ATGCAGATGG AGAAGGTGAA GGGCACAGCC GACGTGATCA TCGCCAAGCA GCGCCACGGA CCGACCGGCA CCGTCAAGCT CGCCTTCCAG TCCGAGTTCA CGCGCTTCTC CGACCTCGCC GATCCTTCGT TCACGCAATA CGAGCATTGA
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Protein sequence | MNDAARKLAP LAKDQAEQHY REAPNNLEAE QALLGAILVN NDAYYRVSDF LKPVHLYEPL HRRIFEIAGE IIRMGKTANP VTVKTFLKAD DKVGDLTVAQ YLARLAAEAV SIINAEDYGR AIYDLALRRS LITIGEDMVN IAYDAPLDMP PQNQIEDAER RLFELAETGR YDGGFQSFND AVALAIDMAG QAFERDGHLS GISTGIHSLD SKMGGLQRSD LIILAGRPGM GKTSLATNIA YNIAASYDPE VQPDGSFKAK NGGVVGFYSL EMSSEQLATR IISEQTEVSS SKIRRGEISE ADFEKLVACS QMMQKVPLYI DQTGGISIAQ LAARARRLKR QRGLDVLVVD YIQLMTGSKK SGENRVQEIT EITTGLKALG KELNVPIIAL SQLSRAVESR EDKRPQLSDL RESGSIEQDA DVVLFVFREE YYVKNVEPRD EFDPKYEEWK MQMEKVKGTA DVIIAKQRHG PTGTVKLAFQ SEFTRFSDLA DPSFTQYEH
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