Gene Smed_0734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0734 
Symbol 
ID5321571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp788168 
End bp789667 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content61% 
IMG OID640789671 
Productreplicative DNA helicase 
Protein accessionYP_001326425 
Protein GI150395958 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00267216 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.96044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG CAGCGCGAAA GCTCGCCCCT TTGGCCAAGG ATCAGGCGGA ACAGCATTAT 
CGCGAGGCGC CGAACAATCT GGAAGCGGAG CAGGCGCTGC TCGGCGCTAT TCTCGTCAAT
AACGACGCCT ATTACCGCGT CTCGGACTTC CTGAAGCCCG TCCACCTCTA TGAGCCGCTG
CATCGCAGGA TTTTCGAGAT CGCGGGCGAA ATCATCCGCA TGGGGAAGAC GGCCAACCCC
GTAACCGTCA AGACCTTCCT CAAGGCCGAC GACAAGGTCG GCGACCTGAC GGTCGCGCAA
TATCTCGCGC GTCTCGCCGC CGAAGCAGTG TCCATCATCA ATGCCGAGGA TTATGGCCGC
GCGATCTACG ACCTGGCGCT CCGCCGGTCG CTGATCACCA TCGGCGAAGA CATGGTGAAT
ATCGCCTATG ACGCGCCCCT CGACATGCCC CCGCAAAACC AGATCGAAGA CGCCGAACGA
AGGTTGTTCG AACTGGCCGA GACCGGTCGC TACGACGGCG GCTTTCAGTC CTTCAACGAC
GCGGTGGCGC TTGCCATCGA CATGGCCGGG CAGGCATTCG AGCGCGATGG TCATCTTTCC
GGCATTTCCA CAGGTATCCA CTCGCTCGAC TCGAAGATGG GCGGCCTGCA GCGCTCGGAC
CTGATCATTC TTGCCGGCCG TCCCGGCATG GGCAAGACCT CGCTTGCGAC CAATATCGCC
TACAACATCG CTGCGTCCTA CGACCCTGAG GTTCAACCCG ATGGTTCCTT CAAGGCGAAG
AACGGGGGGG TTGTCGGCTT CTATTCGCTC GAAATGTCCT CCGAGCAGCT AGCCACCCGT
ATCATCTCGG AGCAGACCGA AGTCTCGTCG TCGAAGATCC GCCGCGGCGA GATTTCGGAA
GCCGATTTCG AGAAGCTCGT AGCCTGCTCG CAGATGATGC AGAAGGTGCC TCTCTATATC
GACCAGACCG GCGGCATCTC AATCGCCCAG CTTGCGGCGC GCGCACGCCG CCTGAAGCGG
CAGCGCGGCC TGGACGTGCT CGTGGTCGAC TACATCCAGC TGATGACCGG TTCGAAGAAA
TCGGGCGAAA ACCGTGTGCA GGAGATCACC GAAATCACCA CCGGCCTGAA GGCGCTCGGC
AAGGAACTGA ACGTGCCGAT CATCGCGCTT TCGCAGCTCT CCCGTGCCGT CGAGAGCCGC
GAGGACAAGC GCCCGCAGCT CTCCGACCTG CGTGAATCGG GCTCGATCGA ACAGGATGCA
GACGTCGTGC TCTTCGTGTT CCGCGAGGAA TATTACGTGA AGAATGTGGA ACCGCGCGAC
GAGTTCGATC CGAAATATGA AGAGTGGAAG ATGCAGATGG AGAAGGTGAA GGGCACAGCC
GACGTGATCA TCGCCAAGCA GCGCCACGGA CCGACCGGCA CCGTCAAGCT CGCCTTCCAG
TCCGAGTTCA CGCGCTTCTC CGACCTCGCC GATCCTTCGT TCACGCAATA CGAGCATTGA
 
Protein sequence
MNDAARKLAP LAKDQAEQHY REAPNNLEAE QALLGAILVN NDAYYRVSDF LKPVHLYEPL 
HRRIFEIAGE IIRMGKTANP VTVKTFLKAD DKVGDLTVAQ YLARLAAEAV SIINAEDYGR
AIYDLALRRS LITIGEDMVN IAYDAPLDMP PQNQIEDAER RLFELAETGR YDGGFQSFND
AVALAIDMAG QAFERDGHLS GISTGIHSLD SKMGGLQRSD LIILAGRPGM GKTSLATNIA
YNIAASYDPE VQPDGSFKAK NGGVVGFYSL EMSSEQLATR IISEQTEVSS SKIRRGEISE
ADFEKLVACS QMMQKVPLYI DQTGGISIAQ LAARARRLKR QRGLDVLVVD YIQLMTGSKK
SGENRVQEIT EITTGLKALG KELNVPIIAL SQLSRAVESR EDKRPQLSDL RESGSIEQDA
DVVLFVFREE YYVKNVEPRD EFDPKYEEWK MQMEKVKGTA DVIIAKQRHG PTGTVKLAFQ
SEFTRFSDLA DPSFTQYEH