Gene Smed_0724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0724 
Symbol 
ID5321561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp777792 
End bp778679 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content64% 
IMG OID640789661 
ProductCDP-diacylglycerol--serine O-phosphatidyltransferase 
Protein accessionYP_001326415 
Protein GI150395948 
COG category[I] Lipid transport and metabolism 
COG ID[COG1183] Phosphatidylserine synthase 
TIGRFAM ID[TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAC CCCGCCACGA AAAATCCGCA GGGAACCAGG AAGTCGCCGC TGAGCATGCC 
CAGGCGGCTG GATCGCAGGA TACCGGTTCG CACGACAAGG CGCGAGGGCC GCGATTGCGC
GAGATCCCTC TACGGCTGAT GGTCCCCAAC ATGATCACCG TTCTGGCGAT CTGTGCGGGT
CTTTCGGGCA TCCGCCTGGC TTTCGAGAAT CGTTTCGAGC TCGCGGTTGC GATGGTCCTG
CTGGCCGCCT TCCTCGACGG CATAGACGGA CGCATCGCGC GTCTCCTGAA GGCGACGTCG
AGCTTCGGGG TGCAGATGGA CTCGCTTGCC GACATCATCA ATTTCGGTGT TGCGCCCGCG
CTCGTCCTCT ACGTCTTTCT GCTGGACCAA GCCCGTTCCG TCGGGTGGAT CGCGGCGTTG
ATCTATGCCA TTGCCGCGGG CCTCAGACTC GCGCGTTTCA ATGTGATGGC GGAGCGCCAG
GTCAAGGCGA GGTGGCAGTC GGAATATTTC GTCGGCGTTC CTGCGCCGGC CGGCGCGATG
CTGGTGCTGC TGCCGGTCTA TCTTGGCCTG CTGGGCCTTG CGCCGGACCG GACCTTTGCG
CTGATCGCAT CGGTCTATAC CGTCCTGATC GCCTTCCTGA TGGTCAGCCG TCTGCCCGTC
TGGTCGGGCA AGTCGGAAAA CCGCGTGCGA CGCGACCTGG TGCTGCCCGT CATCCTGGTC
GTCGTCCTCT ATGTAGCGAC GCTGATGACC TATACATGGG AGACGATGGC AGTGACGGCG
GTCGCCTATC TGGTGACCTT GCCCTTTGGC GCCCGTTCCT GGCAGCGCAA ATACGGCGAC
TGGCCTTCCG CCCACGGGAA CGATGGCCTG CCGGGGGACA GCGAGTAG
 
Protein sequence
MEEPRHEKSA GNQEVAAEHA QAAGSQDTGS HDKARGPRLR EIPLRLMVPN MITVLAICAG 
LSGIRLAFEN RFELAVAMVL LAAFLDGIDG RIARLLKATS SFGVQMDSLA DIINFGVAPA
LVLYVFLLDQ ARSVGWIAAL IYAIAAGLRL ARFNVMAERQ VKARWQSEYF VGVPAPAGAM
LVLLPVYLGL LGLAPDRTFA LIASVYTVLI AFLMVSRLPV WSGKSENRVR RDLVLPVILV
VVLYVATLMT YTWETMAVTA VAYLVTLPFG ARSWQRKYGD WPSAHGNDGL PGDSE