Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0722 |
Symbol | |
ID | 5321559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 775094 |
End bp | 776977 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789659 |
Product | ABC transporter related |
Protein accession | YP_001326413 |
Protein GI | 150395946 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCCAGA AGAAGACGGT TTCCGCCGAC AGCGCCAATC CGATCGAAAC CATAGCTAAT CTTCGGCCAT ATATGTGGCC GGCTGATCGG CTTGATCTGA AACTGAGGGT CGTCTGGGCG ACGGTTATCC TGGTGATCGC CAAGGCCGTG CTCATCCTCG TCCCCTATTT CTTCAAGTGG GCGACGGATG CGCTCAACAA CAAGCCGGAG GCGCTGGGTT TTCTGCCGGT ATTCCTGACG GGCGCCGTCA TGCTGGTGCT CGCCTATAAT TTTGCCCGTC TGCTGCAGGC CGGTCTCAAC CAGTTGCGCG ATGCGCTGTT CGCCAGTGTT GGCCAACACG CCGTCCGGCA ACTTGCCTAC AAGACCTTCG TTCACATGCA TCAGCTTTCG CTGCGCTTCC ATCTCGAGCG GCGTACCGGC GGGCTCTCGC GCATCATCGA GCGCGGCACC AAAGGCATCG AGACGATCGT CCGCTTCACA ATCCTCAACA GCGTGCCGAC TCTCATCGAG TTCCTGCTGA CTGCGGTGAT CTTCTGGTGG GGCTACGGCT TCAAATACCT TCTGGTAACC GCGGTCACTG TCTCTCTCTA CATCTGGTTC ACGGTAAGAG CGAGCGACTG GCGCATCGCC ATTCGCCGGT CGATGAACGA CAGCGACACC GATGCGAACA CAAAGGCGAT CGATTCGTTG CTCAACTTCG AAACCGTCAA ATATTTCGGC AACGAGGAGA TGGAGGCGAA CCGCTTCGAC AAATCCATGG AGCGTTACGA GCGGGCAGCA ACGCAGGTCT GGACGTCGCT CGGCTGGCTG AACTTCGGGC AGGCACTAAT CTTCGGAGCC GGGACCGCGG TGATGATGAC GATTTCGGCG CTCGCCGTGC AGCGCGGCGA ACAGACCATC GGCGATTTCG TCTTCATCAA TGCGATGCTG ATCCAGCTCG CGATTCCGCT GAACTTCATC GGTTTCGTCT ACCGCGAAAT CCGCCAGGGG CTGACGGATA TCGAGCATAT GTTCGATCTC CTCGACGTTC GGGCGGAGGT CGTCGACCGG CCCGATGCGA AGGAGCTCGA GATCCAGCGA GGCGCGATCG CCTTCAAGGA TGTACAGTTC GCCTATGACC CGGCACGGCC GATTCTGAAG GGGATCAGCT TCGAGGTGCC CGCTGGAAAG ACAGTGGCCG TCGTCGGCCC CTCCGGAGCC GGCAAGTCGA CCCTGTCGCG GCTGCTCTAT CGCTTTTACG ACGTGCAGGA AGGATCGATT ACCATCGACG GTCAGGACGT GCGCGACATC ACTCAGAAGA GCCTCCGCGC CGTAATCGGG ATGGTGCCGC AGGATACGGT GCTCTTCAAC GACACGATTG CCTACAATAT CCGTTACGGC CGGGTGACGG CGAGCGACGC CGAGGTCGAG GCGGCGGCGG AGGCAGCGCA GATTGCCGAC TTTATCCGCG ACCTGCCGGA TGGTTACCGA TCCATGGTCG GCGAGCGCGG GCTGAAGCTG TCCGGTGGCG AGAAACAGCG CGTCGCGATA GCGCGCACCA TCCTGAAGGC GCCGCCAATC CTGATTCTCG ACGAGGCCAC TTCCGCACTG GACACGAAGA CGGAGCAGGA AATCCAGGCT GCGCTCGATA TCGTGTCGCG CAACCGAACC ACGCTCGTCA TCGCCCATCG CCTGTCGACA GTTATCAATG CCGACGAGAT CATCGTCCTG AAGGATGGCG TCATCGCCGA ACGCGGCACG CATGGCGAAC TGATTGACCG CAACGGCCTC TATGCCTCCA TGTGGAGCCG CCAGCGCGAG GCAACGCAGG CCGAGGAGCA GCTGAAGCGC GTGCGTGAGA GCGACGATCT CGGCATTGTC GACCGCGGTG TTCCGGCGCT CTGA
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Protein sequence | MPQKKTVSAD SANPIETIAN LRPYMWPADR LDLKLRVVWA TVILVIAKAV LILVPYFFKW ATDALNNKPE ALGFLPVFLT GAVMLVLAYN FARLLQAGLN QLRDALFASV GQHAVRQLAY KTFVHMHQLS LRFHLERRTG GLSRIIERGT KGIETIVRFT ILNSVPTLIE FLLTAVIFWW GYGFKYLLVT AVTVSLYIWF TVRASDWRIA IRRSMNDSDT DANTKAIDSL LNFETVKYFG NEEMEANRFD KSMERYERAA TQVWTSLGWL NFGQALIFGA GTAVMMTISA LAVQRGEQTI GDFVFINAML IQLAIPLNFI GFVYREIRQG LTDIEHMFDL LDVRAEVVDR PDAKELEIQR GAIAFKDVQF AYDPARPILK GISFEVPAGK TVAVVGPSGA GKSTLSRLLY RFYDVQEGSI TIDGQDVRDI TQKSLRAVIG MVPQDTVLFN DTIAYNIRYG RVTASDAEVE AAAEAAQIAD FIRDLPDGYR SMVGERGLKL SGGEKQRVAI ARTILKAPPI LILDEATSAL DTKTEQEIQA ALDIVSRNRT TLVIAHRLST VINADEIIVL KDGVIAERGT HGELIDRNGL YASMWSRQRE ATQAEEQLKR VRESDDLGIV DRGVPAL
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