Gene Smed_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0720 
Symbol 
ID5321557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp772222 
End bp772839 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content61% 
IMG OID640789657 
Producthypothetical protein 
Protein accessionYP_001326411 
Protein GI150395944 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.735678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGG AAACGACACC GATTCTATCC GTCTGCGTTT ATTGCGGTTC TCAGCCCGGG 
CGCGACGAGG CCCACATCGA GGCCGGCCGC ATCCTCGGCA GATCGATCGC CGAACATGGT
CTTCGCCTCG TCTATGGCGG CGGCACGCGC GGGATCATGG GCGCCGTGGC AAGCGGCGTA
CTTTCGGCCG GAGGACACGT GACCGGCATC ATTCCCGAGT TCCTGATGGA CAAGGAAGCG
ACCCGCCACT CGCTCGGCCA ACTGAACGAA CTGATCGTCA CCGCCGACAT GCATGAGCGC
AAGCACGAGA TGTTCGAGCG CGCGGATGCT TTCGTCGCCC TTCCAGGCGG GATCGGTACG
CTCGAGGAAA TTGTCGAAAT CATGACATGG GCACAACTCG GCCGTCACAG GAAACCCATG
GTCTTCGGCA ATGTCAACGG CTTCTGGGAC CCGATGCTGG AGCTGATCGA CCACATGCGC
GACCAGGGTT TCGTTCATAC GGCGCATCTG GTGCAGCCGC TCGTTATCGG CCGGCCGGAA
GACATCGTCC CTGCAATAGT TGCGTCGACC TCCGCGAACG GACGCGACGG CGAAGCCGGT
ATCATCGCGA AACTCTGA
 
Protein sequence
MNKETTPILS VCVYCGSQPG RDEAHIEAGR ILGRSIAEHG LRLVYGGGTR GIMGAVASGV 
LSAGGHVTGI IPEFLMDKEA TRHSLGQLNE LIVTADMHER KHEMFERADA FVALPGGIGT
LEEIVEIMTW AQLGRHRKPM VFGNVNGFWD PMLELIDHMR DQGFVHTAHL VQPLVIGRPE
DIVPAIVAST SANGRDGEAG IIAKL