| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0711 |
|---|
| Symbol | |
|---|
| ID | 5321548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 764103 |
|---|
| End bp | 764873 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640789648 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001326402 |
|---|
| Protein GI | 150395935 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2135] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.590948 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGAC GTTTTGCGCT TACGGCGACA CCGGAGGAAT TGCTGGAGCT GTTCGGCCTC
CTGGAGGCCG AGGGCTTTCC CGCGCGCTTC AATATCGCGC CGACGCAGCC GATCATCGTA
GTCGTCGCAT CCGAACGGGC AGAGCCCGGC AGTAATCTGC CGGAGCGCAA GGCTCTGCTC
GTCCGCTGGG GTTTTACGCC CGGCTGGGTG AAGGACCCGC GCAAGTTTCC ACTGCTGATC
AATGCGCGGG CCGAGACAGC GATCGAGAAG GCGGCATTTC GCGCGGCGAT GCGCCACCGC
CGCGTTTTGG TGCCGGCTTC CGGCTTCTAC GAGTGGCAGC GCCCCGCCAA AGGCAGCCGG
GATGCCGCGC AAGCGTTTTG GGTGCGGCCC AGAAAGGGCG GGATCGTTGC CCTCGCCGGA
CTTATGGAGA CATGGTCTTC CGCTGACGGT TCCGAAGTCG ACACCGCAGC GATCCTGACG
ACGGGCGCGA ACAGGGCCGT CAGCCACATC CATGACCGAA TGCCGGTCGT GATCCAGCCG
GAGGACTTTT CCCGTTGGCT CGATTGCAAG AGCCAGGAGC CGCGCGACGT CGCCGATCTC
ATGGTGCCTG CGGCGGAAGA TTACTTCGAG GCAATCCCGA TTTCGGAGAA GGTGAACAAG
GTCACCAATA CCGGGCCGGA CCTCCAGGAT GAAGTCACGC CCGCTGCGCC AATCCCGAAG
AAAAGGCGCG CCGACGACCG GGATGATGGC GGACAGATGT CGCTGTTCTA A
|
|---|
| Protein sequence | MCGRFALTAT PEELLELFGL LEAEGFPARF NIAPTQPIIV VVASERAEPG SNLPERKALL
VRWGFTPGWV KDPRKFPLLI NARAETAIEK AAFRAAMRHR RVLVPASGFY EWQRPAKGSR
DAAQAFWVRP RKGGIVALAG LMETWSSADG SEVDTAAILT TGANRAVSHI HDRMPVVIQP
EDFSRWLDCK SQEPRDVADL MVPAAEDYFE AIPISEKVNK VTNTGPDLQD EVTPAAPIPK
KRRADDRDDG GQMSLF
|
|---|
| |